RNA–Protein interactions for RNA: ENST00000359265.8

PDLIM5-203, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,189 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-203ENST00000359265 ZNF516Q92618 1163 aa14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 SEMA4DQ92854 862 aa14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 ANKRD36BP1Q96IX9 119 aa14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 CCDC42Q96M95 316 aa14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 ASB2Q96Q27 587 aa14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 DEF6Q9H4E7 631 aa14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 NHEJ1Q9H9Q4 299 aaPredicted RBP14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 C1orf112Q9NSG2 853 aa14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 TRMT13Q9NUP7 481 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 TRMT1Q9NXH9 659 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 AJAP1Q9UKB5 411 aaPredicted RBP14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 PIN4Q9Y237 131 aaKnown RBP14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 PPP2R2CQ9Y2T4 447 aa14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 EPN1Q9Y6I3 576 aaPredicted RBP14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 NCOR1O75376 2440 aa14.93□□□□□ -0.02
PDLIM5-203ENST00000359265 PTPRJQ12913 1337 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 F8VZ95 297 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 TLR3O15455 904 aaKnown RBP14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 TMEM191BP0C7N4 346 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 CCDC172P0C7W6 258 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 CLCN1P35523 988 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 SOX5P35711 763 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 MFAP3P55082 362 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 DRAP1Q14919 205 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 DUOXA2Q1HG44 320 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 WDR44Q5JSH3 913 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 PHLDB3Q6NSJ2 640 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 ENOSF1Q7L5Y1 443 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 ARHGEF19Q8IW93 802 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 PPP1R13BQ96KQ4 1090 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 ACAP3Q96P50 834 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 NECAB3Q96P71 396 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 UHRF1Q96T88 793 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 DESI2Q9BSY9 194 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 IMPG2Q9BZV3 1241 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 SENP6Q9GZR1 1112 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 UBE2TQ9NPD8 197 aaPredicted RBP14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 ARHGAP20Q9P2F6 1191 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 ADGRG1Q9Y653 693 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 BZW2Q9Y6E2 419 aaKnown RBP14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 LTBP2Q14767 1821 aa14.92□□□□□ -0.02
PDLIM5-203ENST00000359265 TCF20Q9UGU0 1960 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 USP27XA6NNY8 438 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 EIF3CLB5ME19 914 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 CTSHP09668 335 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 HOXA11P31270 313 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 EIF4A3P38919 411 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 THPOP40225 353 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 PRKCIP41743 596 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 CDK7P50613 346 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 KRT83P78385 493 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 SMAD3P84022 425 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 TFAMQ00059 246 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 MGAT3Q09327 533 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 KLHL30Q0D2K2 578 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 ARHGAP44Q17R89 818 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 FAM228AQ86W67 206 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 NT5DC4Q86YG4 428 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 CD302Q8IX05 232 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 PPM1KQ8N3J5 372 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 OR5B17Q8NGF7 314 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 CAGE1Q8TC20 777 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 WNT8BQ93098 351 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 EIF3CQ99613 913 aaKnown RBP14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 LRFN3Q9BTN0 628 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 TRIM6Q9C030 488 aaPredicted RBP14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 MTMR12Q9C0I1 747 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 ASB7Q9H672 318 aa14.91□□□□□ -0.02
PDLIM5-203ENST00000359265 AKR1B10O60218 316 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 RPS6KA5O75582 802 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 GFPT2O94808 682 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 CLSTN1O94985 981 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 PLEKP08567 350 aaPredicted RBP14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 ANXA13P27216 316 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 KIF11P52732 1056 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 YARSP54577 528 aaKnown RBP14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 ARID5AQ03989 594 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 BFSP2Q13515 415 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 SPA17Q15506 151 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 C1orf53Q5VUE5 145 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 HGSNATQ68CP4 663 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 FAM126BQ8IXS8 530 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 EFCAB13Q8IY85 973 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 TMEM192Q8IY95 271 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 ACRBPQ8NEB7 543 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 ATXN2LQ8WWM7 1075 aaKnown RBP14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 PPM1EQ8WY54 764 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 PLEKHA5Q9HAU0 1116 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 NOC2LQ9Y3T9 749 aaKnown RBP14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 TANC1Q9C0D5 1861 aa14.9□□□□□ -0.02
PDLIM5-203ENST00000359265 LACTBL1A8MY62 500 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 DCDC2CA8MYV0 355 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 KIF2AO00139 706 aaPredicted RBP14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 LRRN2O75325 713 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 OFD1O75665 1012 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 VNN1O95497 513 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 CHRNA1P02708 482 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 NFICP08651 508 aa14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 NOP14P78316 857 aaKnown RBP14.89□□□□□ -0.03
PDLIM5-203ENST00000359265 GCNT1Q02742 428 aa14.89□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms