RNA–Protein interactions for RNA: ENST00000358894.10

COL20A1-201, Transcript of collagen type XX alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL20A1, Length 4,172 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-201ENST00000358894 SPOPLQ6IQ16 392 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 RAPGEF5Q92565 580 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 FAM84AQ96KN4 292 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 TGS1Q96RS0 853 aaKnown RBP13□□□□□ -0.33
COL20A1-201ENST00000358894 PDCD2LQ9BRP1 358 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 AGTP01019 485 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 ITGA8P53708 1063 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 PTENP60484 403 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 NOP14P78316 857 aaKnown RBP13□□□□□ -0.33
COL20A1-201ENST00000358894 EAPPQ56P03 285 aaPredicted RBP13□□□□□ -0.33
COL20A1-201ENST00000358894 AGO4Q9HCK5 861 aaKnown RBP13□□□□□ -0.33
COL20A1-201ENST00000358894 ANKEF1Q9NU02 776 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 NUP98P52948 1817 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 NDC80O14777 642 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 BAG2O95816 211 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 CLK2P49760 499 aaKnown RBP13□□□□□ -0.33
COL20A1-201ENST00000358894 STAT5BP51692 787 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 PSMC1P62191 440 aaKnown RBP13□□□□□ -0.33
COL20A1-201ENST00000358894 PDIA2Q13087 525 aaKnown RBP13□□□□□ -0.33
COL20A1-201ENST00000358894 P3H1Q32P28 736 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 PPP6R3Q5H9R7 873 aaPredicted RBP13□□□□□ -0.33
COL20A1-201ENST00000358894 CFAP157Q5JU67 520 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 MAP7D3Q8IWC1 876 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 ZNF280CQ8ND82 737 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 IL31RAQ8NI17 732 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 CCHCR1Q8TD31 782 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 ZBTB10Q96DT7 871 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 RBM15Q96T37 977 aaKnown RBP eCLIP13□□□□□ -0.33
COL20A1-201ENST00000358894 MYH10P35580 1976 aa13□□□□□ -0.33
COL20A1-201ENST00000358894 PIK3R2O00459 728 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 MT-ND3P03897 115 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 CALB1P05937 261 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 CYP3A4P08684 503 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 PYGMP11217 842 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 RASSF2P50749 326 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 TMC3Q7Z5M5 1100 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 ANKMY2Q8IV38 441 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 TTC16Q8NEE8 873 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 SEPT10Q9P0V9 454 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 IP6K2Q9UHH9 426 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 VAV3Q9UKW4 847 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 IGSF9BQ9UPX0 1349 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 MED7O43513 233 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 WEE2P0C1S8 567 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 MYBL1P10243 752 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 ITGB5P18084 799 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 ACTR2P61160 394 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 ACAD10Q6JQN1 1059 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 SH3BP5LQ7L8J4 393 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 RNF34Q969K3 372 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 MCEEQ96PE7 176 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 PARVAQ9NVD7 372 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 NOP53Q9NZM5 478 aaKnown RBP12.99□□□□□ -0.33
COL20A1-201ENST00000358894 IGKV6D-41A0A0C4DH26 115 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 TMEM120BA0PK00 339 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 MARCKSL1P49006 195 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 CXCL9Q07325 125 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 WDR72Q3MJ13 1102 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 NOP9Q86U38 636 aaKnown RBP12.99□□□□□ -0.33
COL20A1-201ENST00000358894 NLRP7Q8WX94 980 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 TRAIPQ9BWF2 469 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 FGFR1OP2Q9NVK5 253 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 HEY1Q9Y5J3 304 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 PRPSAP2O60256 369 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 VCAM1P19320 739 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 CAV1Q03135 178 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 DGKZQ13574 1117 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 DUOXA2Q1HG44 320 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 PPP1R2P3Q6NXS1 205 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP12.99□□□□□ -0.33
COL20A1-201ENST00000358894 AKT1S1Q96B36 256 aa12.99□□□□□ -0.33
COL20A1-201ENST00000358894 PKD1L3Q7Z443 1732 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 SLC1A1P43005 524 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 SNX16P57768 344 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 GRM1Q13255 1194 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 SPARCL1Q14515 664 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 SLC15A2Q16348 729 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 ANGEL2Q5VTE6 544 aaKnown RBP12.98□□□□□ -0.33
COL20A1-201ENST00000358894 TATDN1Q6P1N9 297 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 TRIM72Q6ZMU5 477 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 APBB1IPQ7Z5R6 666 aaPredicted RBP12.98□□□□□ -0.33
COL20A1-201ENST00000358894 LRRC71Q8N4P6 559 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 MSL3Q8N5Y2 521 aaKnown RBP12.98□□□□□ -0.33
COL20A1-201ENST00000358894 SREK1Q8WXA9 508 aaKnown RBP12.98□□□□□ -0.33
COL20A1-201ENST00000358894 MRPL4Q9BYD3 311 aaKnown RBP12.98□□□□□ -0.33
COL20A1-201ENST00000358894 OPHN1O60890 802 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 FDX1P10109 184 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 ITIH2P19823 946 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 MUTP22033 750 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 PDE1CQ14123 709 aaPredicted RBP12.98□□□□□ -0.33
COL20A1-201ENST00000358894 SMTNL2Q2TAL5 461 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 C4orf33Q8N1A6 199 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 CFAP36Q96G28 342 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 KIF9Q9HAQ2 790 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 MYH7P12883 1935 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 MARF1Q9Y4F3 1742 aaKnown RBP12.98□□□□□ -0.33
COL20A1-201ENST00000358894 GOLGA8RI6L899 631 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 STK10O94804 968 aaKnown RBP12.98□□□□□ -0.33
COL20A1-201ENST00000358894 GZMAP12544 262 aa12.98□□□□□ -0.33
COL20A1-201ENST00000358894 GPC3P51654 580 aa12.98□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 79.3 ms