RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 KCNQ3O43525 872 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 GNA15P30679 374 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 OASLQ15646 514 aaKnown RBP9.21□□□□□ -0.94
COL6A6-201ENST00000358511 IRGCQ6NXR0 463 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 ARMCX6Q7L4S7 300 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 EPS8L3Q8TE67 593 aaKnown RBP9.21□□□□□ -0.94
COL6A6-201ENST00000358511 ARIH1Q9Y4X5 557 aaPredicted RBP9.21□□□□□ -0.94
COL6A6-201ENST00000358511 USP32Q8NFA0 1604 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 CLDN3O15551 220 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 ST13P50502 369 aaKnown RBP9.21□□□□□ -0.94
COL6A6-201ENST00000358511 TSPY1Q01534 308 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 ZBTB33Q86T24 672 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 ANKMY2Q8IV38 441 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 ADSSL1Q8N142 457 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 JDP2Q8WYK2 163 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 NGLY1Q96IV0 654 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 CCDC17Q96LX7 622 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 HEXIM2Q96MH2 286 aaKnown RBP9.21□□□□□ -0.94
COL6A6-201ENST00000358511 NR1H4Q96RI1 486 aaPredicted RBP9.21□□□□□ -0.94
COL6A6-201ENST00000358511 GORASP1Q9BQQ3 440 aa9.21□□□□□ -0.94
COL6A6-201ENST00000358511 NXF1Q9UBU9 619 aaKnown RBP9.21□□□□□ -0.94
COL6A6-201ENST00000358511 XPO7Q9UIA9 1087 aaKnown RBP9.21□□□□□ -0.94
COL6A6-201ENST00000358511 XPOTO43592 962 aaKnown RBP9.2□□□□□ -0.94
COL6A6-201ENST00000358511 SRGAP2CP0DJJ0 459 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 POU5F1BQ06416 359 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 IMPG1Q17R60 797 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 ZC3H12BQ5HYM0 836 aaKnown RBP9.2□□□□□ -0.94
COL6A6-201ENST00000358511 CDKL3Q8IVW4 592 aaPredicted RBP9.2□□□□□ -0.94
COL6A6-201ENST00000358511 ZBED2Q9BTP6 218 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 TMEM245Q9H330 911 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 XPO5Q9HAV4 1204 aaKnown RBP eCLIP9.2□□□□□ -0.94
COL6A6-201ENST00000358511 APEX2Q9UBZ4 518 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 MAP3K15Q6ZN16 1313 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 IGSF1Q8N6C5 1336 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 H2AFYO75367 372 aaKnown RBP9.2□□□□□ -0.94
COL6A6-201ENST00000358511 MCAMP43121 646 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 PTPN12Q05209 780 aaKnown RBP9.2□□□□□ -0.94
COL6A6-201ENST00000358511 AP3B2Q13367 1082 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 NCAPG2Q86XI2 1143 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 CEP95Q96GE4 821 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 ZFYVE19Q96K21 471 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 PCMTD2Q9NV79 361 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 PYGMP11217 842 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 PCNX4Q63HM2 1172 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 MIS18BP1Q6P0N0 1132 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 TMED8Q6PL24 325 aaPredicted RBP9.2□□□□□ -0.94
COL6A6-201ENST00000358511 C3orf62Q6ZUJ4 267 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 EFCAB6Q5THR3 1501 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 CFAP99D6REC4 459 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 APRTP07741 180 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 FOXR1Q6PIV2 292 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 NUP93Q8N1F7 819 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 RBM46Q8TBY0 533 aaKnown RBP9.2□□□□□ -0.94
COL6A6-201ENST00000358511 CEP170P1Q96L14 293 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 AGPAT1Q99943 283 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 C11orf70Q9BRQ4 267 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 SCN3BQ9NY72 215 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 FAM95CA0A1B0GW59 222 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 RHOBTB3O94955 611 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 MAGEA4P43358 317 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 TJAP1Q5JTD0 557 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 ITPRIPL1Q6GPH6 555 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 CYB5R4Q7L1T6 521 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 KLHL23Q8NBE8 558 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 ERGIC2Q96RQ1 377 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 ANO3Q9BYT9 981 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 ZNF446Q9NWS9 450 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 MCM8Q9UJA3 840 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 INPP5FQ9Y2H2 1132 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 APOL1O14791 398 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 TM9SF1O15321 606 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 TRAPPC3O43617 180 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 MYL2P10916 166 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 UCHL3P15374 230 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 NUDT2P50583 147 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 ABCB5Q2M3G0 1257 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 TBC1D10BQ4KMP7 808 aaPredicted RBP9.2□□□□□ -0.94
COL6A6-201ENST00000358511 TRAPPC3LQ5T215 181 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 USP17L2Q6R6M4 530 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 STK32AQ8WU08 396 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 CDHR1Q96JP9 859 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 PUS3Q9BZE2 481 aaKnown RBP9.2□□□□□ -0.94
COL6A6-201ENST00000358511 BARHL2Q9NY43 387 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 UBAP1Q9NZ09 502 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 PRKAB2O43741 272 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 FAM58BPP0C7Q3 252 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 ITGA8P53708 1063 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 SLC34A1Q06495 639 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 TSC22D1Q15714 1073 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 B3GNT6Q6ZMB0 384 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 SNX19Q92543 992 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 MSTO1Q9BUK6 570 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 CCSER1Q9C0I3 900 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 RUBCNLQ9H714 662 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 NRBP2Q9NSY0 501 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 A2ML1A8K2U0 1454 aa9.2□□□□□ -0.94
COL6A6-201ENST00000358511 EXOSC10Q01780 885 aaKnown RBP9.19□□□□□ -0.94
COL6A6-201ENST00000358511 KCNA1Q09470 495 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 SCARA5Q6ZMJ2 495 aa9.19□□□□□ -0.94
COL6A6-201ENST00000358511 GIMAP8Q8ND71 665 aaPredicted RBP9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms