RNA–Protein interactions for RNA: ENST00000358207.9

SMARCAL1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a like 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SMARCAL1, Length 3,056 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAL1-202ENST00000358207 KCNJ12Q14500 433 aa9.91□□□□□ -0.82
SMARCAL1-202ENST00000358207 GSTA3Q16772 222 aa9.91□□□□□ -0.82
SMARCAL1-202ENST00000358207 FAM209AQ5JX71 171 aa9.91□□□□□ -0.82
SMARCAL1-202ENST00000358207 LMBRD2Q68DH5 695 aaPredicted RBP9.91□□□□□ -0.82
SMARCAL1-202ENST00000358207 UBE2Q1Q7Z7E8 422 aa9.91□□□□□ -0.82
SMARCAL1-202ENST00000358207 MB21D1Q8N884 522 aa9.91□□□□□ -0.82
SMARCAL1-202ENST00000358207 PTPN18Q99952 460 aa9.91□□□□□ -0.82
SMARCAL1-202ENST00000358207 TBCCD1Q9NVR7 557 aa9.91□□□□□ -0.82
SMARCAL1-202ENST00000358207 DDX43Q9NXZ2 648 aaKnown RBP9.91□□□□□ -0.82
SMARCAL1-202ENST00000358207 PRELID1Q9Y255 219 aa9.91□□□□□ -0.82
SMARCAL1-202ENST00000358207 TSC22D4Q9Y3Q8 395 aa9.91□□□□□ -0.82
SMARCAL1-202ENST00000358207 FADS3Q9Y5Q0 445 aa9.91□□□□□ -0.82
SMARCAL1-202ENST00000358207 BHMG1C9JSJ3 638 aaPredicted RBP9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 O00370 1275 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 RNASEH1O60930 286 aaKnown RBP9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 KRT36O76013 467 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 IFNAR1P17181 557 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 CCT8P50990 548 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 IKQ13123 557 aaPredicted RBP9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 LRP8Q14114 963 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 LRRC14Q15048 493 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 CNGA2Q16280 664 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 FXNQ16595 210 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 SBK1Q52WX2 424 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 MOB2Q70IA6 237 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 IRF2BP1Q8IU81 584 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 AGGF1Q8N302 714 aaeCLIP9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 KRI1Q8N9T8 703 aaKnown RBP9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 GDAP1Q8TB36 358 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 BRI3BPQ8WY22 251 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 EPB41L4BQ9H329 900 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 SLTMQ9NWH9 1034 aaKnown RBP eCLIP9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 PCDHA13Q9Y5I0 950 aa9.9□□□□□ -0.82
SMARCAL1-202ENST00000358207 A0A087X0B3 334 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 FBP2O00757 339 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 VILLO15195 856 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 CYTH3O43739 400 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 PDE5AO76074 875 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 T-ENOLP0DO92 83 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 VPS41P49754 854 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 SH3BGRP55822 239 aaPredicted RBP9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 TBL3Q12788 808 aaKnown RBP9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 CCDC6Q16204 474 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 ZCWPW2Q504Y3 356 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 TYW1BQ6NUM6 668 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 C17orf99Q6UX52 265 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 Q6ZNX1 250 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 CAPN12Q6ZSI9 719 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 SH3TC2Q8TF17 1288 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 CCDC127Q96BQ5 260 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 INPP4AQ96PE3 977 aaPredicted RBP9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 HEPHQ9BQS7 1158 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 CCDC28BQ9BUN5 200 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 TTYH3Q9C0H2 523 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 MYLK2Q9H1R3 596 aa9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 LARSQ9P2J5 1176 aaKnown RBP9.9□□□□□ -0.83
SMARCAL1-202ENST00000358207 BTBD19C9JJ37 291 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 KLRF2D3W0D1 207 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 BUB1O43683 1085 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 STK10O94804 968 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 CYLC2Q14093 348 aaPredicted RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 VGLL4Q14135 290 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 RRP1BQ14684 758 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 DSTYKQ6XUX3 929 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 C16orf86Q6ZW13 317 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 ZNF507Q8TCN5 953 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 ZMAT2Q96NC0 199 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 OLFM3Q96PB7 478 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 ZNF184Q99676 751 aaPredicted RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 STK33Q9BYT3 514 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 IFIH1Q9BYX4 1025 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 DRC3Q9H069 523 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 SYNCQ9H7C4 482 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 EURLQ9NYK6 297 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 PTTG2Q9NZH5 202 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 SEC63Q9UGP8 760 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 PCDHB6Q9Y5E3 794 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 SHMT1P34896 483 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 TUFMP49411 452 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 PSMC1P62191 440 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 DCTN2Q13561 401 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 INAQ16352 499 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 PDCD4Q53EL6 469 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 UBAP2Q5T6F2 1119 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 BPHLQ86WA6 291 aaPredicted RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 GPIHBP1Q8IV16 184 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 EIF1ADQ8N9N8 165 aaKnown RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 DTX3LQ8TDB6 740 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 HPS3Q969F9 1004 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 SH3GL1Q99961 368 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 KIAA1683Q9H0B3 1180 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 USP29Q9HBJ7 922 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 ZFYVE28Q9HCC9 887 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 FBXO2Q9UK22 296 aaPredicted RBP9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 CCPG1Q9ULG6 757 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 DNAH12Q6ZR08 3092 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 LTBP2Q14767 1821 aa9.89□□□□□ -0.83
SMARCAL1-202ENST00000358207 A0A0G2JLL6 359 aaPredicted RBP9.88□□□□□ -0.83
SMARCAL1-202ENST00000358207 TLDC2A0PJX2 215 aa9.88□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms