RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 PCDHA7Q9UN72 937 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 ANGPT2O15123 496 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 PGK2P07205 417 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 GLMNQ92990 594 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 VPS50Q96JG6 964 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 RHBGQ9H310 441 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 IPPQ9Y573 584 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 PFKFB2O60825 505 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 PARNO95453 639 aaKnown RBP10.25□□□□□ -0.77
CHD3-202ENST00000358181 RARBP10826 455 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 GYS1P13807 737 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 TPI1P60174 286 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 KLC1Q07866 573 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 MTMR1Q13613 665 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 E2F4Q16254 413 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 MAPK6Q16659 721 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 IFNEQ86WN2 208 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 SESN1Q9Y6P5 492 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 GAP43P17677 238 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 EPHB4P54760 987 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 SCRN3Q0VDG4 424 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 CCNIQ14094 377 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 TRIM25Q14258 630 aaKnown RBP10.25□□□□□ -0.77
CHD3-202ENST00000358181 TOGARAM2Q6ZUX3 1019 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 MMGT1Q8N4V1 131 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 ASAP3Q8TDY4 903 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 SCFD1Q8WVM8 642 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 A6NNZ2 444 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 NFIBO00712 420 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 STRNO43815 780 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 PDGFRBP09619 1106 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 ARF3P61204 181 aaPredicted RBP10.25□□□□□ -0.77
CHD3-202ENST00000358181 ARF1P84077 181 aaKnown RBP10.25□□□□□ -0.77
CHD3-202ENST00000358181 HIST2H2ACQ16777 129 aaPredicted RBP10.25□□□□□ -0.77
CHD3-202ENST00000358181 TUBB8Q3ZCM7 444 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 HIST2H2AA3Q6FI13 130 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 NEK7Q8TDX7 302 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 TBCKQ8TEA7 893 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 ADAM33Q9BZ11 813 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 SLC30A1Q9Y6M5 507 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 LRRIQ3A6PVS8 624 aaPredicted RBP10.25□□□□□ -0.77
CHD3-202ENST00000358181 VAC14Q08AM6 782 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 SCAIQ8N9R8 606 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 ST13P5Q8NFI4 369 aaPredicted RBP10.25□□□□□ -0.77
CHD3-202ENST00000358181 ATL2Q8NHH9 583 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 RNF25Q96BH1 459 aaPredicted RBP10.25□□□□□ -0.77
CHD3-202ENST00000358181 OLFM1Q99784 485 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 NRBP1Q9UHY1 535 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 PADI4Q9UM07 663 aa10.25□□□□□ -0.77
CHD3-202ENST00000358181 UMPSP11172 480 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 MCTP2Q6DN12 878 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 SWSAP1Q6NVH7 229 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 SRLQ86TD4 932 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 GINS4Q9BRT9 223 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 ZFYVE28Q9HCC9 887 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 SOHLH2Q9NX45 425 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 NOVA2Q9UNW9 492 aaKnown RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 SH3GLB1Q9Y371 365 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 HOXB7P09629 217 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 STIP1P31948 543 aaKnown RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 ALDH9A1P49189 494 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 EN1Q05925 392 aaPredicted RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 CAMK2GQ13555 558 aaPredicted RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 HEATR4Q86WZ0 1026 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 TTLL6Q8N841 843 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 PIH1D3Q9NQM4 214 aaKnown RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 TRIM10Q9UDY6 481 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 MYO1CO00159 1063 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 MXI1P50539 228 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 STXBP1P61764 594 aaKnown RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 CDH18Q13634 790 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 ARMC4Q5T2S8 1044 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 PDIK1LQ8N165 341 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.24□□□□□ -0.77
CHD3-202ENST00000358181 ANAPC7Q9UJX3 599 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 OPLAHO14841 1288 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 SLC16A4O15374 487 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 ACSL4O60488 711 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 CTNND1O60716 968 aaKnown RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 IL10P22301 178 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 PDHA2P29803 388 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 ROR1Q01973 937 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 ZSCAN26Q16670 478 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 C10orf120Q5SQS8 335 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 PID1Q7Z2X4 250 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 SIK3Q9Y2K2 1263 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 AKAP10O43572 662 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 CD2BP2O95400 341 aaKnown RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 DR1Q01658 176 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 DOK6Q6PKX4 331 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 ENGASEQ8NFI3 743 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 MOSPD2Q8NHP6 518 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 TDRD3Q9H7E2 651 aaKnown RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 GID8Q9NWU2 228 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 ABI2Q9NYB9 513 aaPredicted RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 ZFATQ9P243 1243 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 ZFP69BQ9UJL9 534 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 TCOF1Q13428 1488 aaKnown RBP10.24□□□□□ -0.77
CHD3-202ENST00000358181 CEP170Q5SW79 1584 aa10.24□□□□□ -0.77
CHD3-202ENST00000358181 MAPK13O15264 365 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms