RNA–Protein interactions for RNA: ENST00000357395.7

SYNE2-203, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 5 BASIC

Gene SYNE2, Length 21,555 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-203ENST00000357395 CROTQ9UKG9 612 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 AFPP02771 609 aaKnown RBP4.9□□□□□ -1.63
SYNE2-203ENST00000357395 TTC33Q6PID6 262 aaPredicted RBP4.9□□□□□ -1.63
SYNE2-203ENST00000357395 CCDC28AQ8IWP9 274 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 RFFLQ8WZ73 363 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 TUBGCP2Q9BSJ2 902 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 RP1L1Q8IWN7 2480 aaPredicted RBP4.9□□□□□ -1.63
SYNE2-203ENST00000357395 ATP7BP35670 1465 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 PDPK1O15530 556 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 NFRKBQ6P4R8 1299 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 BARGINQ6ZT62 677 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 BBS7Q8IWZ6 715 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 ZNF420Q8TAQ5 688 aaPredicted RBP4.9□□□□□ -1.63
SYNE2-203ENST00000357395 CAPSLQ8WWF8 208 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 MTMR6Q9Y217 621 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 CHRM1P11229 460 aaPredicted RBP4.9□□□□□ -1.63
SYNE2-203ENST00000357395 AP2S1P53680 142 aaPredicted RBP4.9□□□□□ -1.63
SYNE2-203ENST00000357395 NCAPHQ15003 741 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 NAIF1Q69YI7 327 aaPredicted RBP4.9□□□□□ -1.63
SYNE2-203ENST00000357395 ANKRD42Q8N9B4 389 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 CDHR1Q96JP9 859 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 FTOQ9C0B1 505 aaKnown RBP eCLIP4.9□□□□□ -1.63
SYNE2-203ENST00000357395 INTS2Q9H0H0 1204 aaKnown RBP4.9□□□□□ -1.63
SYNE2-203ENST00000357395 METTL5Q9NRN9 209 aaKnown RBP4.9□□□□□ -1.63
SYNE2-203ENST00000357395 MAGED1Q9Y5V3 778 aaPredicted RBP4.9□□□□□ -1.63
SYNE2-203ENST00000357395 RBM47A0AV96 593 aaKnown RBP4.9□□□□□ -1.63
SYNE2-203ENST00000357395 SCUBE1Q8IWY4 988 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 ARHGEF40Q8TER5 1519 aa4.9□□□□□ -1.63
SYNE2-203ENST00000357395 POU1F1P28069 291 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ADD2P35612 726 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 BEND6Q5SZJ8 279 aaPredicted RBP4.89□□□□□ -1.63
SYNE2-203ENST00000357395 SEC16BQ96JE7 1060 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 CDH19Q9H159 772 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 NEUROG2Q9H2A3 272 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 VAV3Q9UKW4 847 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 SYCP2Q9BX26 1530 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 CCNE2O96020 404 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 PIK3R1P27986 724 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 GSTT1P30711 240 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 CEBPGP53567 150 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 PTK2Q05397 1052 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 CDH18Q13634 790 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 KSR1Q8IVT5 923 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ANAPC7Q9UJX3 599 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 TSNQ15631 228 aaKnown RBP4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ANKRD26P1Q6NSI1 321 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ZCCHC12Q6PEW1 402 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 EXOC3L1Q86VI1 746 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 PRPF19Q9UMS4 504 aaKnown RBP4.89□□□□□ -1.63
SYNE2-203ENST00000357395 SUPT3HO75486 399 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 PAX3P23760 479 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 CASP5P51878 434 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 TRAPPC11Q7Z392 1133 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ALLCQ8N6M5 410 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 NCOA5Q9HCD5 579 aaKnown RBP4.89□□□□□ -1.63
SYNE2-203ENST00000357395 RAPGEFL1Q9UHV5 662 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ZBTB1Q9Y2K1 713 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 C2orf74A8MZ97 194 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 FAM199XQ6PEV8 388 aaPredicted RBP4.89□□□□□ -1.63
SYNE2-203ENST00000357395 REXO1Q8N1G1 1221 aaKnown RBP4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ARID5AQ03989 594 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 TTC38Q5R3I4 469 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 IL17RAQ96F46 866 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 RBBP8Q99708 897 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 PTPN23Q9H3S7 1636 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 FAM172BPA6NC97 362 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 NBPF26B4DH59 902 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 F8W810 466 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 SLC16A3O15427 465 aaKnown RBP4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ZBTB11O95625 1053 aaPredicted RBP4.89□□□□□ -1.63
SYNE2-203ENST00000357395 PTX3P26022 381 aaPredicted RBP4.89□□□□□ -1.63
SYNE2-203ENST00000357395 TCP11X2Q5H9J9 407 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 SLFN12LQ6IEE8 588 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 GET4Q7L5D6 327 aaPredicted RBP4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ERO1BQ86YB8 467 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 AGR3Q8TD06 166 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 MAP2K7O14733 419 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ATP4AP20648 1035 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ARCQ7LC44 396 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 COLGALT2Q8IYK4 626 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ACTRT1Q8TDG2 376 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 FAF2Q96CS3 445 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 AIF1LQ9BQI0 150 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 WDR70Q9NW82 654 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 RRN3Q9NYV6 651 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 SLC45A4Q5BKX6 768 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 KCTD16Q68DU8 428 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 HDAC11Q96DB2 347 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ANAPC2Q9UJX6 822 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 COL17A1Q9UMD9 1497 aaPredicted RBP4.89□□□□□ -1.63
SYNE2-203ENST00000357395 KCNQ4P56696 695 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 S100A12P80511 92 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 APPBP2Q92624 585 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 MYO10Q9HD67 2058 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 AKAP8O43823 692 aaKnown RBP4.89□□□□□ -1.63
SYNE2-203ENST00000357395 OR52Z1P0C646 297 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 PTGS2P35354 604 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ARMCX5Q6P1M9 558 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 ANKRD13BQ86YJ7 626 aa4.89□□□□□ -1.63
SYNE2-203ENST00000357395 SGF29Q96ES7 293 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms