RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 SP110Q9HB58 689 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 PSMC3IPQ9P2W1 217 aaPredicted RBP12.38□□□□□ -0.43
COL9A1-202ENST00000357250 VGLL3A8MV65 326 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 EIF3HO15372 352 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL9A1-202ENST00000357250 RALAP11233 206 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 FGFR2P21802 821 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 AARSP49588 968 aaKnown RBP eCLIP12.38□□□□□ -0.43
COL9A1-202ENST00000357250 EZH2Q15910 746 aaKnown RBP12.38□□□□□ -0.43
COL9A1-202ENST00000357250 CYFIP1Q7L576 1253 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 RASSF3Q86WH2 238 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 ELMOD1Q8N336 334 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 RNF149Q8NC42 400 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 ASPSCR1Q9BZE9 553 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 MAP3K20Q9NYL2 800 aaKnown RBP12.38□□□□□ -0.43
COL9A1-202ENST00000357250 SNX5Q9Y5X3 404 aa12.38□□□□□ -0.43
COL9A1-202ENST00000357250 TRAPPC3O43617 180 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 DIAPH2O60879 1101 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 ACADSBP45954 432 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 ABCE1P61221 599 aaKnown RBP12.37□□□□□ -0.43
COL9A1-202ENST00000357250 OCA2Q04671 838 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 ST3GAL1Q11201 340 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 DYNC1I2Q13409 638 aaKnown RBP12.37□□□□□ -0.43
COL9A1-202ENST00000357250 NAA30Q147X3 362 aaPredicted RBP12.37□□□□□ -0.43
COL9A1-202ENST00000357250 RARS2Q5T160 578 aaKnown RBP12.37□□□□□ -0.43
COL9A1-202ENST00000357250 CCNYL1Q8N7R7 359 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 C3orf20Q8ND61 904 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 ISCUQ9H1K1 167 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.37□□□□□ -0.43
COL9A1-202ENST00000357250 IGSF9BQ9UPX0 1349 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 FRMD3A2A2Y4 597 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 MTSS1O43312 755 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 GYPCP04921 128 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 PRLRP16471 622 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 AP1B1Q10567 949 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 R3HDM1Q15032 1099 aaKnown RBP12.37□□□□□ -0.43
COL9A1-202ENST00000357250 BTBD8Q5XKL5 378 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 TTC23LQ6PF05 361 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 RAD9BQ6WBX8 426 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 PID1Q7Z2X4 250 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 COL23A1Q86Y22 540 aaPredicted RBP12.37□□□□□ -0.43
COL9A1-202ENST00000357250 ANKS1AQ92625 1134 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 TSPAN17Q96FV3 270 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 ZNF668Q96K58 619 aaPredicted RBP12.37□□□□□ -0.43
COL9A1-202ENST00000357250 RANBP17Q9H2T7 1088 aaKnown RBP12.37□□□□□ -0.43
COL9A1-202ENST00000357250 PAK5Q9P286 719 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 PRR12Q9ULL5 1215 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 PLAGL2Q9UPG8 496 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 KRT16P08779 473 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 HOXD10P28358 340 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 MMP14P50281 582 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 NCOA4Q13772 614 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 HOMEZQ8IX15 550 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 RBM15Q96T37 977 aaKnown RBP eCLIP12.37□□□□□ -0.43
COL9A1-202ENST00000357250 MXRA8Q9BRK3 442 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 RSAD1Q9HA92 442 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 DCTN4Q9UJW0 460 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 E2F6O75461 281 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 CD4P01730 458 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 IMPG1Q17R60 797 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 WDR72Q3MJ13 1102 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 MFSD14CQ5VZR4 134 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 NYAP1Q6ZVC0 841 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 ING2Q9H160 280 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 AGPAT5Q9NUQ2 364 aa12.37□□□□□ -0.43
COL9A1-202ENST00000357250 NR3C2P08235 984 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 ANO4Q32M45 955 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 PRUNE1Q86TP1 453 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 RBBP8NLQ8NC74 664 aaPredicted RBP12.36□□□□□ -0.43
COL9A1-202ENST00000357250 SNX19Q92543 992 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 FAM161BQ96MY7 647 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 FNDC3AQ9Y2H6 1198 aaKnown RBP12.36□□□□□ -0.43
COL9A1-202ENST00000357250 USP15Q9Y4E8 981 aaPredicted RBP12.36□□□□□ -0.43
COL9A1-202ENST00000357250 C3orf70A6NLC5 250 aaPredicted RBP12.36□□□□□ -0.43
COL9A1-202ENST00000357250 E5RI56 91 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 MYO1DO94832 1006 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 SLC25A27O95847 323 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 FNTAP49354 379 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 TROAPQ12815 778 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 LRRC23Q53EV4 343 aaPredicted RBP12.36□□□□□ -0.43
COL9A1-202ENST00000357250 HP1BP3Q5SSJ5 553 aaPredicted RBP12.36□□□□□ -0.43
COL9A1-202ENST00000357250 KLHDC7AQ5VTJ3 777 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 USP38Q8NB14 1042 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 SCFD1Q8WVM8 642 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 EXT2Q93063 718 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 NCLNQ969V3 563 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 ERP44Q9BS26 406 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 EHD2Q9NZN4 543 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 GTF3C4Q9UKN8 822 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 PPME1Q9Y570 386 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 BCL9O00512 1426 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 FAM47DPA6NHR8 397 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 PI4K2BG5E9Z4 385 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 RBM43Q6ZSC3 357 aaKnown RBP12.36□□□□□ -0.43
COL9A1-202ENST00000357250 ICA1LQ8NDH6 482 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 KATNAL1Q9BW62 490 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 ZCCHC17Q9NP64 241 aaKnown RBP12.36□□□□□ -0.43
COL9A1-202ENST00000357250 KLC4Q9NSK0 619 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 PRMT7Q9NVM4 692 aaPredicted RBP12.36□□□□□ -0.43
COL9A1-202ENST00000357250 ARHGAP26Q9UNA1 814 aa12.36□□□□□ -0.43
COL9A1-202ENST00000357250 FARP1Q9Y4F1 1045 aaPredicted RBP12.36□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms