RNA–Protein interactions for RNA: ENST00000356660.8

BDNF-202, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,018 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-202ENST00000356660 C1orf146Q5VVC0 180 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 DAB2IPQ5VWQ8 1189 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 CENPUQ71F23 418 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 ECHDC2Q86YB7 292 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 XXYLT1Q8NBI6 393 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 CCDC110Q8TBZ0 833 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 CCDC124Q96CT7 223 aaKnown RBP13.29□□□□□ -0.28
BDNF-202ENST00000356660 DDX50Q9BQ39 737 aaKnown RBP13.29□□□□□ -0.28
BDNF-202ENST00000356660 HEY2Q9UBP5 337 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 STK24Q9Y6E0 443 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 SPEF2Q9C093 1822 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 BTNL10A8MVZ5 291 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 CALCAP01258 141 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 ENO1P06733 434 aaKnown RBP13.29□□□□□ -0.28
BDNF-202ENST00000356660 KRT4P19013 534 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 TNFAIP1Q13829 316 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 LMBRD2Q68DH5 695 aaPredicted RBP13.29□□□□□ -0.28
BDNF-202ENST00000356660 SCYL2Q6P3W7 929 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 ZNF341Q9BYN7 854 aa13.29□□□□□ -0.28
BDNF-202ENST00000356660 SEPT9Q9UHD8 586 aaPredicted RBP13.29□□□□□ -0.28
BDNF-202ENST00000356660 DISP2A7MBM2 1401 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 NWD2Q9ULI1 1742 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 DKC1O60832 514 aaKnown RBP eCLIP13.28□□□□□ -0.28
BDNF-202ENST00000356660 PEX5P50542 639 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 DMP1Q13316 513 aaPredicted RBP13.28□□□□□ -0.28
BDNF-202ENST00000356660 MAP7Q14244 749 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 EMC10Q5UCC4 262 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 ZDHHC24Q6UX98 284 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 SLC47A2Q86VL8 602 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 DCLRE1BQ9H816 532 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 NINJ2Q9NZG7 142 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 COG5Q9UP83 839 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 SUGT1Q9Y2Z0 365 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 TTLL3Q9Y4R7 772 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 SLC16A4O15374 487 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 CCDC22O60826 627 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 CAV1Q03135 178 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 BLMHQ13867 455 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 RNF220Q5VTB9 566 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 DCAF12L1Q5VU92 463 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 MAB21L3Q8N8X9 362 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 SMC1BQ8NDV3 1235 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 ACCSQ96QU6 501 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 TMEM165Q9HC07 324 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 ZDHHC18Q9NUE0 388 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP13.28□□□□□ -0.28
BDNF-202ENST00000356660 YY1P25490 414 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 GRAMD1BQ3KR37 738 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 GADL1Q6ZQY3 521 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 SDCCAG8Q86SQ7 713 aaPredicted RBP13.28□□□□□ -0.28
BDNF-202ENST00000356660 TRIM74Q86UV6 250 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 TRIM73Q86UV7 250 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 SPIRE2Q8WWL2 714 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 ZNF668Q96K58 619 aaPredicted RBP13.28□□□□□ -0.28
BDNF-202ENST00000356660 FAM20AQ96MK3 541 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 CYP39A1Q9NYL5 469 aa13.28□□□□□ -0.28
BDNF-202ENST00000356660 PDE4DIPQ5VU43 2346 aa13.27□□□□□ -0.28
BDNF-202ENST00000356660 TISP43B9A030 160 aa13.27□□□□□ -0.28
BDNF-202ENST00000356660 CHRNA5P30532 468 aa13.27□□□□□ -0.28
BDNF-202ENST00000356660 SLC12A3P55017 1021 aa13.27□□□□□ -0.28
BDNF-202ENST00000356660 COG7P83436 770 aa13.27□□□□□ -0.28
BDNF-202ENST00000356660 MTFR1Q15390 333 aa13.27□□□□□ -0.28
BDNF-202ENST00000356660 MTERF2Q49AM1 385 aa13.27□□□□□ -0.28
BDNF-202ENST00000356660 PADI6Q6TGC4 694 aa13.27□□□□□ -0.28
BDNF-202ENST00000356660 ACSF2Q96CM8 615 aaPredicted RBP13.27□□□□□ -0.28
BDNF-202ENST00000356660 PI4K2AQ9BTU6 479 aa13.27□□□□□ -0.28
BDNF-202ENST00000356660 GRHL1Q9NZI5 618 aa13.27□□□□□ -0.28
BDNF-202ENST00000356660 ANGPTL2Q9UKU9 493 aa13.27□□□□□ -0.28
BDNF-202ENST00000356660 BAZ2AQ9UIF9 1905 aaKnown RBP13.27□□□□□ -0.29
BDNF-202ENST00000356660 NPR1P16066 1061 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 CACNA2D1P54289 1103 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 PKN2Q16513 984 aaKnown RBP13.27□□□□□ -0.29
BDNF-202ENST00000356660 ARHGEF19Q8IW93 802 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 KLHL23Q8NBE8 558 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 FAM13CQ8NE31 585 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 RAB3IL1Q8TBN0 382 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 IWS1Q96ST2 819 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 THTPAQ9BU02 230 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 SLC5A4Q9NY91 659 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 NKX1-2Q9UD57 310 aaPredicted RBP13.27□□□□□ -0.29
BDNF-202ENST00000356660 ZMYND8Q9ULU4 1186 aaPredicted RBP13.27□□□□□ -0.29
BDNF-202ENST00000356660 PCDHB4Q9Y5E5 795 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 MYH7BA7E2Y1 1941 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 ARFGEF2Q9Y6D5 1785 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 C5P01031 1676 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 B2RBV5 119 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 CREB3O43889 395 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 KRT10P13645 584 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 VCAM1P19320 739 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 TMPRSS15P98073 1019 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 ZNF394Q53GI3 561 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 CASC4Q6P4E1 433 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 FLAD1Q8NFF5 587 aa13.27□□□□□ -0.29
BDNF-202ENST00000356660 SPDYE5A6NIY4 337 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 H3BRJ5 948 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 INO80B-WBP1J3KQ70 363 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 SMNDC1O75940 238 aaKnown RBP eCLIP13.26□□□□□ -0.29
BDNF-202ENST00000356660 ZWINTO95229 277 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 LMNB2Q03252 620 aa13.26□□□□□ -0.29
BDNF-202ENST00000356660 MYLK4Q86YV6 388 aaPredicted RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms