RNA–Protein interactions for RNA: ENST00000355086.7

SRGAP1-201, Transcript of SLIT-ROBO Rho GTPase activating protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRGAP1, Length 23,331 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP1-201ENST00000355086 CATSPERBQ9H7T0 1116 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 ZBTB1Q9Y2K1 713 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 MLH3Q9UHC1 1453 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 GYS2P54840 703 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 SGO1Q5FBB7 561 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 OTUD5Q96G74 571 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 NPHS2Q9NP85 383 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 USP17L10C9JJH3 530 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 KBTBD13C9JR72 458 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 USP39Q53GS9 565 aaKnown RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 GPR63Q9BZJ6 419 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 TEX28O15482 410 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 HMBSP08397 361 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 LIFRP42702 1097 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 SHROOM1Q2M3G4 852 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 VPS37AQ8NEZ2 397 aa6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 GPR101Q96P66 508 aaPredicted RBP6.07□□□□□ -1.44
SRGAP1-201ENST00000355086 PLA2G4AP47712 749 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 BFSP2Q13515 415 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 SNX17Q15036 470 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 MRPL48Q96GC5 212 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 INTS2Q9H0H0 1204 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 TAF1DQ9H5J8 278 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 KLHL11Q9NVR0 708 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 SYCP2Q9BX26 1530 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 POTEFA5A3E0 1075 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 POTEIP0CG38 1075 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 SERPINB1P30740 379 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 GPSM2P81274 684 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 CAPRIN2Q6IMN6 1127 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 POTEGQ6S5H5 508 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 POTEEQ6S8J3 1075 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 RNF149Q8NC42 400 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 ACAD9Q9H845 621 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 DNAL1Q4LDG9 190 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 FAM20AQ96MK3 541 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 M0R3G1 203 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 RAD54LQ92698 747 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 PRPF18Q99633 342 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 TASP1Q9H6P5 420 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 UPP2O95045 317 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 P4HBP07237 508 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 HPGDP15428 266 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 MZF1P28698 734 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 TMED10P49755 219 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 PRMT1Q99873 361 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 FHDC1Q9C0D6 1143 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 CDC16Q13042 620 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 JADE3Q92613 823 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 CAND2O75155 1236 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 RAB6BQ9NRW1 208 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 UVRAGQ9P2Y5 699 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 AGO2Q9UKV8 859 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 RGS2P41220 211 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 RGS7P49802 495 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 NLRP11P59045 1033 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 MGAT5BQ3V5L5 792 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 CHSY1Q86X52 802 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 MICU2Q8IYU8 434 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 GPD1LQ8N335 351 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 OSBP2Q969R2 916 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 IL1RL2Q9HB29 575 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 MYO3BQ8WXR4 1341 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 PRCPP42785 496 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 THOC2Q8NI27 1593 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 PFASO15067 1338 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 AP3M2P53677 418 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 VPS50Q96JG6 964 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 C20orf96Q9NUD7 363 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 V9GYQ6 96 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 PRR23AA6NEV1 266 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 ASB14A6NK59 587 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 ATP1A1P05023 1023 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 TCN1P20061 433 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 GPATCH8Q9UKJ3 1502 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 FGFR4P22455 802 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 RFX3P48380 749 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 HIST2H2ACQ16777 129 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 HIST2H2AA3Q6FI13 130 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 RGS5O15539 181 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 PDGFRBP09619 1106 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 CHRM3P20309 590 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 DHX34Q14147 1143 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 SYCP2LQ5T4T6 812 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 C18orf8Q96DM3 657 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 APOL5Q9BWW9 433 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 ANTXR1Q9H6X2 564 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 PNMA8BQ9ULN7 279 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 ALDH1A3P47895 512 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 HNRNPH2P55795 449 aaKnown RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 PFKFB3Q16875 520 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 NFRKBQ6P4R8 1299 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 SYDE1Q6ZW31 735 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 CCDC60Q8IWA6 550 aaPredicted RBP6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 ATL2Q8NHH9 583 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 USP33Q8TEY7 942 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 GLYCTKQ8IVS8 523 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 PIM2Q9P1W9 311 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 ANKRD65E5RJM6 399 aa6.06□□□□□ -1.44
SRGAP1-201ENST00000355086 ATP6V1C1P21283 382 aa6.06□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms