RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 SLC12A6Q9UHW9 1150 aa23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 SNCAIPQ9Y6H5 919 aa23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 TCRBV7S2A1N4TA0A589 114 aa23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 VNN1O95497 513 aa23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 TGFB3P10600 412 aa23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 PTP4A2Q12974 167 aa23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 BYSLQ13895 437 aaKnown RBP23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 TARBP2Q15633 366 aaKnown RBP23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 CPA5Q8WXQ8 436 aa23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 ART4Q93070 314 aa23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 PAGR1Q9BTK6 254 aa23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 TARS2Q9BW92 718 aaKnown RBP23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 CNOT10Q9H9A5 744 aaKnown RBP23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 MRPL47Q9HD33 250 aaKnown RBP23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 CNTN6Q9UQ52 1028 aa23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 ZNFX1Q9P2E3 1918 aaKnown RBP23.76■■□□□ 1.39
NKX2-1-201ENST00000354822 MROH7Q68CQ1 1323 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 RRM1P23921 792 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 SYDE1Q6ZW31 735 aaPredicted RBP23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 CPNE8Q86YQ8 564 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 ZNF526Q8TF50 670 aaPredicted RBP23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 HAPLN2Q9GZV7 340 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 ADARB2Q9NS39 739 aaKnown RBP23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 LOC285556D6RIA3 1793 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 ADGRA2Q96PE1 1338 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 ATXN2Q99700 1313 aaKnown RBP23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 GSTTP1A0A1W2PQM5 241 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 TRIM66O15016 1216 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 DDNO94850 711 aaPredicted RBP23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 MAGOHP61326 146 aaKnown RBP23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 SGO2Q562F6 1265 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 ZPBP2Q6X784 338 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 MICALCLQ6ZW33 695 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 MON1BQ7L1V2 547 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 DHX30Q7L2E3 1194 aaKnown RBP eCLIP23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 NLRP14Q86W24 1093 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 ABRAQ8N0Z2 381 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 TLCD1Q96CP7 247 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 ZBTB45Q96K62 511 aaPredicted RBP23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 EPB41L4BQ9H329 900 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 RABEP2Q9H5N1 569 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 PCDHB4Q9Y5E5 795 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 FAM169AQ9Y6X4 670 aa23.75■■□□□ 1.39
NKX2-1-201ENST00000354822 CLDN3O15551 220 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 ADCY3O60266 1144 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 FARP2O94887 1054 aaPredicted RBP23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 FAM107AO95990 144 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 RARGP13631 454 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 UBA1P22314 1058 aaKnown RBP23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 EDNRBP24530 442 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 STAT5BP51692 787 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 CALCOCO2Q13137 446 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 VGLL4Q14135 290 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 KCTD19Q17RG1 926 aaPredicted RBP23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 CYFIP2Q96F07 1278 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 PGM2Q96G03 612 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 CCT8L2Q96SF2 557 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 HOMER3Q9NSC5 361 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 CLTAP09496 248 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 EFNA5P52803 228 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 WNT7BP56706 349 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 PPP1R7Q15435 360 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 UPF1Q92900 1129 aaKnown RBP eCLIP23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 TMEM109Q9BVC6 243 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 WHRNQ9P202 907 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 GGA2Q9UJY4 613 aa23.74■■□□□ 1.39
NKX2-1-201ENST00000354822 LCTP09848 1927 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 CNTNAP2Q9UHC6 1331 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 A0A087WUV0 522 aaPredicted RBP23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 MAFO75444 373 aaPredicted RBP23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 PROSCO94903 275 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 GNA15P30679 374 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 FSTL1Q12841 308 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 GRM1Q13255 1194 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 C6orf118Q5T5N4 469 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 SMYD5Q6GMV2 418 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 PHF13Q86YI8 300 aaPredicted RBP23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 GRK7Q8WTQ7 553 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 FAM167AQ96KS9 214 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 ANKFY1Q9P2R3 1169 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 PTPN22Q9Y2R2 807 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 SCINQ9Y6U3 715 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 PTPRFP10586 1907 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 PTPRJQ12913 1337 aa23.73■■□□□ 1.39
NKX2-1-201ENST00000354822 CALCAP01258 141 aa23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 PAEPP09466 180 aa23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 SPOPLQ6IQ16 392 aa23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 TMEM270Q6UE05 265 aa23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 EXOC8Q8IYI6 725 aa23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 GADD45GIP1Q8TAE8 222 aaPredicted RBP23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 MYCBPAPQ8TBZ2 947 aa23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 ZNF473Q8WTR7 871 aaKnown RBP23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 SEPT1Q8WYJ6 367 aa23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 RNF25Q96BH1 459 aaPredicted RBP23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 DCPSQ96C86 337 aaKnown RBP23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 PCYT2Q99447 389 aa23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 IMPG2Q9BZV3 1241 aa23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 APOBEC3GQ9HC16 384 aaKnown RBP23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 ADAM22Q9P0K1 906 aa23.72■■□□□ 1.39
NKX2-1-201ENST00000354822 SIP14410 1827 aa23.72■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms