RNA–Protein interactions for RNA: ENST00000348987.4

SCARF1-202, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best) BASIC

Gene SCARF1, Length 2,619 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-202ENST00000348987 SPAG7O75391 227 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 RASSF2P50749 326 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 CYP1B1Q16678 543 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 TMEM63BQ5T3F8 832 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 RBM26Q5T8P6 1007 aaKnown RBP19.84■□□□□ 0.77
SCARF1-202ENST00000348987 SAMD1Q6SPF0 538 aaPredicted RBP19.84■□□□□ 0.77
SCARF1-202ENST00000348987 SLC13A5Q86YT5 568 aaPredicted RBP19.84■□□□□ 0.77
SCARF1-202ENST00000348987 RHOT2Q8IXI1 618 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 GMCL1Q96IK5 515 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 DYDC2Q96IM9 177 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 FRMD4AQ9P2Q2 1039 aaPredicted RBP19.84■□□□□ 0.77
SCARF1-202ENST00000348987 ASIC3Q9UHC3 531 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 ADGRA3Q8IWK6 1321 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 COL11A2P13942 1736 aaPredicted RBP19.84■□□□□ 0.77
SCARF1-202ENST00000348987 KCNA3P22001 575 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 MARK3P27448 753 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 CACNA2D1P54289 1103 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 KRT17Q04695 432 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 SIX1Q15475 284 aaPredicted RBP19.84■□□□□ 0.77
SCARF1-202ENST00000348987 TRIP13Q15645 432 aaPredicted RBP19.84■□□□□ 0.77
SCARF1-202ENST00000348987 TAF1BQ53T94 588 aaPredicted RBP19.84■□□□□ 0.77
SCARF1-202ENST00000348987 PRUNE1Q86TP1 453 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 GMCL1P1Q8NEA9 526 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 FBXO41Q8TF61 875 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 C1orf54Q8WWF1 131 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 TRAPPC9Q96Q05 1148 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 LMCD1Q9NZU5 365 aa19.84■□□□□ 0.77
SCARF1-202ENST00000348987 RASA4BC9J798 803 aa19.83■□□□□ 0.77
SCARF1-202ENST00000348987 RASA4O43374 803 aa19.83■□□□□ 0.77
SCARF1-202ENST00000348987 LRRN2O75325 713 aa19.83■□□□□ 0.77
SCARF1-202ENST00000348987 DCTN3O75935 186 aa19.83■□□□□ 0.77
SCARF1-202ENST00000348987 FOSP01100 380 aaPredicted RBP19.83■□□□□ 0.77
SCARF1-202ENST00000348987 TRIM49P0CI25 452 aa19.83■□□□□ 0.77
SCARF1-202ENST00000348987 TRIM49CP0CI26 452 aa19.83■□□□□ 0.77
SCARF1-202ENST00000348987 DLATP10515 647 aaKnown RBP19.83■□□□□ 0.77
SCARF1-202ENST00000348987 CBWD6Q4V339 395 aa19.83■□□□□ 0.77
SCARF1-202ENST00000348987 CBWD3Q5JTY5 395 aa19.83■□□□□ 0.77
SCARF1-202ENST00000348987 CBWD5Q5RIA9 395 aa19.83■□□□□ 0.77
SCARF1-202ENST00000348987 OTOP1Q7RTM1 612 aa19.83■□□□□ 0.77
SCARF1-202ENST00000348987 BICD1Q96G01 975 aa19.83■□□□□ 0.77
SCARF1-202ENST00000348987 SCAF8Q9UPN6 1271 aaKnown RBP19.83■□□□□ 0.77
SCARF1-202ENST00000348987 SLC26A4O43511 780 aa19.83■□□□□ 0.76
SCARF1-202ENST00000348987 GGPS1O95749 300 aa19.83■□□□□ 0.76
SCARF1-202ENST00000348987 SKIP12755 728 aa19.83■□□□□ 0.76
SCARF1-202ENST00000348987 RPL13P26373 211 aaKnown RBP19.83■□□□□ 0.76
SCARF1-202ENST00000348987 RCN1Q15293 331 aa19.83■□□□□ 0.76
SCARF1-202ENST00000348987 DSTYKQ6XUX3 929 aa19.83■□□□□ 0.76
SCARF1-202ENST00000348987 C4orf50Q6ZRC1 276 aa19.83■□□□□ 0.76
SCARF1-202ENST00000348987 RNF207Q6ZRF8 634 aa19.83■□□□□ 0.76
SCARF1-202ENST00000348987 FAM81AQ8TBF8 368 aa19.83■□□□□ 0.76
SCARF1-202ENST00000348987 ACER1Q8TDN7 264 aa19.83■□□□□ 0.76
SCARF1-202ENST00000348987 POLR3CQ9BUI4 534 aaPredicted RBP19.83■□□□□ 0.76
SCARF1-202ENST00000348987 UBE2OQ9C0C9 1292 aaKnown RBP19.83■□□□□ 0.76
SCARF1-202ENST00000348987 G3BP2Q9UN86 482 aaKnown RBP19.83■□□□□ 0.76
SCARF1-202ENST00000348987 FAM47DPA6NHR8 397 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 LMNAP02545 664 aaKnown RBP19.82■□□□□ 0.76
SCARF1-202ENST00000348987 FTLP02792 175 aaPredicted RBP19.82■□□□□ 0.76
SCARF1-202ENST00000348987 USP4Q13107 963 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 C11orf63Q6NUN7 778 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 RHBDF2Q6PJF5 856 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 C1orf186Q6ZWK4 172 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 FAM186BQ8IYM0 893 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 SLC20A1Q8WUM9 679 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 FIZ1Q96SL8 496 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 MIPEPQ99797 713 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 OLFML3Q9NRN5 406 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 NINJ2Q9NZG7 142 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 WHRNQ9P202 907 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 GTPBP10A4D1E9 387 aaKnown RBP19.82■□□□□ 0.76
SCARF1-202ENST00000348987 FAM13AO94988 1023 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 GSTA2P09210 222 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 PTPN4P29074 926 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 CYP2J2P51589 502 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 LRRC23Q53EV4 343 aaPredicted RBP19.82■□□□□ 0.76
SCARF1-202ENST00000348987 SH3TC2Q8TF17 1288 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 MAIP1Q8WWC4 291 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 PRMT6Q96LA8 375 aaPredicted RBP19.82■□□□□ 0.76
SCARF1-202ENST00000348987 NRXN2Q9P2S2 1712 aa19.82■□□□□ 0.76
SCARF1-202ENST00000348987 MROH7Q68CQ1 1323 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 CDH16O75309 829 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 ASMTLO95671 621 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 SERPINB4P48594 390 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 TMED2Q15363 201 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 CCDC174Q6PII3 467 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 RDH13Q8NBN7 331 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 BTBD6Q96KE9 485 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 H0YIN7 160 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 TRAFD1O14545 582 aaPredicted RBP19.81■□□□□ 0.76
SCARF1-202ENST00000348987 SLC16A3O15427 465 aaKnown RBP19.81■□□□□ 0.76
SCARF1-202ENST00000348987 ATMINO43313 823 aaPredicted RBP19.81■□□□□ 0.76
SCARF1-202ENST00000348987 KRT36O76013 467 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 ITGA8P53708 1063 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 STRIP1Q5VSL9 837 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 ANKRD35Q8N283 1001 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 CSRNP1Q96S65 589 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 LGALS13Q9UHV8 139 aa19.81■□□□□ 0.76
SCARF1-202ENST00000348987 CLRN2A0PK11 232 aa19.8■□□□□ 0.76
SCARF1-202ENST00000348987 PSMD10O75832 226 aa19.8■□□□□ 0.76
SCARF1-202ENST00000348987 TJP3O95049 919 aa19.8■□□□□ 0.76
SCARF1-202ENST00000348987 CDR2Q01850 454 aa19.8■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms