RNA–Protein interactions for RNA: ENST00000348495.10

SSBP4-202, Transcript of single stranded DNA binding protein 4, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP4, Length 1,721 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-202ENST00000348495 FIGNQ5HY92 759 aa29.2■■■□□ 2.27
SSBP4-202ENST00000348495 CLLU1OSQ5K130 101 aa29.2■■■□□ 2.27
SSBP4-202ENST00000348495 TMEM130Q8N3G9 435 aa29.2■■■□□ 2.27
SSBP4-202ENST00000348495 SPC24Q8NBT2 197 aa29.2■■■□□ 2.27
SSBP4-202ENST00000348495 FAM207AQ9NSI2 230 aaPredicted RBP29.2■■■□□ 2.27
SSBP4-202ENST00000348495 DPP3Q9NY33 737 aa29.2■■■□□ 2.27
SSBP4-202ENST00000348495 TUBGCP4Q9UGJ1 667 aa29.2■■■□□ 2.27
SSBP4-202ENST00000348495 CST3P01034 146 aaPredicted RBP29.2■■■□□ 2.26
SSBP4-202ENST00000348495 ACRP10323 421 aa29.2■■■□□ 2.26
SSBP4-202ENST00000348495 CYP3A5P20815 502 aa29.2■■■□□ 2.26
SSBP4-202ENST00000348495 GUCY2FP51841 1108 aa29.2■■■□□ 2.26
SSBP4-202ENST00000348495 FPGSQ05932 587 aa29.2■■■□□ 2.26
SSBP4-202ENST00000348495 NCOA4Q13772 614 aa29.2■■■□□ 2.26
SSBP4-202ENST00000348495 LIN28BQ6ZN17 250 aaKnown RBP eCLIP29.2■■■□□ 2.26
SSBP4-202ENST00000348495 PCMTD1Q96MG8 357 aaPredicted RBP29.2■■■□□ 2.26
SSBP4-202ENST00000348495 RPS6KC1Q96S38 1066 aa29.2■■■□□ 2.26
SSBP4-202ENST00000348495 ITGA11Q9UKX5 1188 aa29.2■■■□□ 2.26
SSBP4-202ENST00000348495 PCDHB7Q9Y5E2 793 aa29.2■■■□□ 2.26
SSBP4-202ENST00000348495 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP29.2■■■□□ 2.26
SSBP4-202ENST00000348495 PHACTR2O75167 634 aa29.19■■■□□ 2.26
SSBP4-202ENST00000348495 PIK3CAP42336 1068 aa29.19■■■□□ 2.26
SSBP4-202ENST00000348495 CCDC173Q0VFZ6 552 aa29.19■■■□□ 2.26
SSBP4-202ENST00000348495 KLHDC7AQ5VTJ3 777 aa29.19■■■□□ 2.26
SSBP4-202ENST00000348495 BEST2Q8NFU1 509 aa29.19■■■□□ 2.26
SSBP4-202ENST00000348495 NUP58Q9BVL2 599 aa29.19■■■□□ 2.26
SSBP4-202ENST00000348495 GANQ9H2C0 597 aa29.19■■■□□ 2.26
SSBP4-202ENST00000348495 IMPACTQ9P2X3 320 aa29.19■■■□□ 2.26
SSBP4-202ENST00000348495 EFCAB14O75071 495 aa29.18■■■□□ 2.26
SSBP4-202ENST00000348495 GYPCP04921 128 aa29.18■■■□□ 2.26
SSBP4-202ENST00000348495 SCNN1GP51170 649 aa29.18■■■□□ 2.26
SSBP4-202ENST00000348495 SOX4Q06945 474 aaPredicted RBP29.18■■■□□ 2.26
SSBP4-202ENST00000348495 GLB1LQ6UWU2 654 aa29.18■■■□□ 2.26
SSBP4-202ENST00000348495 NPAS4Q8IUM7 802 aa29.18■■■□□ 2.26
SSBP4-202ENST00000348495 SLC38A7Q9NVC3 462 aa29.18■■■□□ 2.26
SSBP4-202ENST00000348495 RNF216Q9NWF9 866 aaPredicted RBP29.18■■■□□ 2.26
SSBP4-202ENST00000348495 XPOTO43592 962 aaKnown RBP29.17■■■□□ 2.26
SSBP4-202ENST00000348495 ZC3H11AO75152 810 aaKnown RBP eCLIP29.17■■■□□ 2.26
SSBP4-202ENST00000348495 BAIAP3O94812 1187 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 THP07101 528 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 FGFR1P11362 822 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 SYN1P17600 705 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 HELQQ8TDG4 1101 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 FBXL5Q9UKA1 691 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 ITGB3P05106 788 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 TRIM21P19474 475 aaKnown RBP29.17■■■□□ 2.26
SSBP4-202ENST00000348495 TRIM14Q14142 442 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 PHLDB3Q6NSJ2 640 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 NEK11Q8NG66 645 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 DPF3Q92784 378 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 IQCDQ96DY2 449 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 XYLT2Q9H1B5 865 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 APEX2Q9UBZ4 518 aa29.17■■■□□ 2.26
SSBP4-202ENST00000348495 ZMYND8Q9ULU4 1186 aaPredicted RBP29.17■■■□□ 2.26
SSBP4-202ENST00000348495 GTF3C5Q9Y5Q8 519 aaPredicted RBP29.17■■■□□ 2.26
SSBP4-202ENST00000348495 ASS1P00966 412 aaKnown RBP29.16■■■□□ 2.26
SSBP4-202ENST00000348495 EPHB4P54760 987 aa29.16■■■□□ 2.26
SSBP4-202ENST00000348495 MYL6P60660 151 aa29.16■■■□□ 2.26
SSBP4-202ENST00000348495 GRIK3Q13003 919 aa29.16■■■□□ 2.26
SSBP4-202ENST00000348495 TRPC3Q13507 836 aa29.16■■■□□ 2.26
SSBP4-202ENST00000348495 PI4K2AQ9BTU6 479 aa29.16■■■□□ 2.26
SSBP4-202ENST00000348495 LRFN2Q9ULH4 789 aa29.16■■■□□ 2.26
SSBP4-202ENST00000348495 ANO9A1A5B4 782 aa29.15■■■□□ 2.26
SSBP4-202ENST00000348495 RNF225M0QZC1 329 aaPredicted RBP29.15■■■□□ 2.26
SSBP4-202ENST00000348495 UCHL3P15374 230 aa29.15■■■□□ 2.26
SSBP4-202ENST00000348495 POLR2BP30876 1174 aaKnown RBP29.15■■■□□ 2.26
SSBP4-202ENST00000348495 NAA15Q9BXJ9 866 aaKnown RBP29.15■■■□□ 2.26
SSBP4-202ENST00000348495 EDEM3Q9BZQ6 932 aa29.15■■■□□ 2.26
SSBP4-202ENST00000348495 INPP5FQ9Y2H2 1132 aa29.15■■■□□ 2.26
SSBP4-202ENST00000348495 A0A1W2PQJ5 194 aa29.14■■■□□ 2.26
SSBP4-202ENST00000348495 POMCP01189 267 aa29.14■■■□□ 2.26
SSBP4-202ENST00000348495 LRPAP1P30533 357 aa29.14■■■□□ 2.26
SSBP4-202ENST00000348495 WDR5P61964 334 aaKnown RBP29.14■■■□□ 2.26
SSBP4-202ENST00000348495 RBP5P82980 135 aa29.14■■■□□ 2.26
SSBP4-202ENST00000348495 SGSM1Q2NKQ1 1148 aa29.14■■■□□ 2.26
SSBP4-202ENST00000348495 NOMO2Q5JPE7 1267 aa29.14■■■□□ 2.26
SSBP4-202ENST00000348495 C9orf57Q5W0N0 161 aa29.14■■■□□ 2.26
SSBP4-202ENST00000348495 APOBEC3GQ9HC16 384 aaKnown RBP29.14■■■□□ 2.26
SSBP4-202ENST00000348495 CEP72Q9P209 647 aa29.14■■■□□ 2.26
SSBP4-202ENST00000348495 CAPN11Q9UMQ6 739 aa29.14■■■□□ 2.26
SSBP4-202ENST00000348495 HOXA2O43364 376 aa29.14■■■□□ 2.25
SSBP4-202ENST00000348495 KRT19P08727 400 aa29.14■■■□□ 2.25
SSBP4-202ENST00000348495 FXR1P51114 621 aaKnown RBP eCLIP29.14■■■□□ 2.25
SSBP4-202ENST00000348495 GJB7Q6PEY0 223 aa29.14■■■□□ 2.25
SSBP4-202ENST00000348495 ARHGEF19Q8IW93 802 aa29.14■■■□□ 2.25
SSBP4-202ENST00000348495 TAF4BQ92750 862 aa29.14■■■□□ 2.25
SSBP4-202ENST00000348495 ELMO3Q96BJ8 720 aa29.14■■■□□ 2.25
SSBP4-202ENST00000348495 NT5C1BQ96P26 610 aa29.14■■■□□ 2.25
SSBP4-202ENST00000348495 CASD1Q96PB1 797 aa29.14■■■□□ 2.25
SSBP4-202ENST00000348495 VRTNQ9H8Y1 702 aa29.14■■■□□ 2.25
SSBP4-202ENST00000348495 GOLGA2P5Q9HBQ8 144 aa29.14■■■□□ 2.25
SSBP4-202ENST00000348495 AJAP1Q9UKB5 411 aaPredicted RBP29.14■■■□□ 2.25
SSBP4-202ENST00000348495 AGAP1Q9UPQ3 857 aa29.14■■■□□ 2.25
SSBP4-202ENST00000348495 DAAM1Q9Y4D1 1078 aa29.14■■■□□ 2.25
SSBP4-202ENST00000348495 TDRD15B5MCY1 1934 aaKnown RBP29.13■■■□□ 2.25
SSBP4-202ENST00000348495 PIRO00625 290 aa29.13■■■□□ 2.25
SSBP4-202ENST00000348495 STAU1O95793 577 aaKnown RBP29.13■■■□□ 2.25
SSBP4-202ENST00000348495 CASP14P31944 242 aa29.13■■■□□ 2.25
SSBP4-202ENST00000348495 POLR2FP61218 127 aaKnown RBP29.13■■■□□ 2.25
SSBP4-202ENST00000348495 LRMPQ12912 555 aa29.13■■■□□ 2.25
SSBP4-202ENST00000348495 WDR44Q5JSH3 913 aa29.13■■■□□ 2.25
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms