RNA–Protein interactions for RNA: ENST00000347849.7

PTPN18-202, Transcript of protein tyrosine phosphatase, non-receptor type 18, humanhuman

TSL 1 (best) BASIC

Gene PTPN18, Length 2,472 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN18-202ENST00000347849 CHADLQ6NUI6 762 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 CRELD2Q6UXH1 353 aaPredicted RBP22.79■■□□□ 1.24
PTPN18-202ENST00000347849 PARP9Q8IXQ6 854 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 DEPTORQ8TB45 409 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 HELQQ8TDG4 1101 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 DHX38Q92620 1227 aaKnown RBP22.79■■□□□ 1.24
PTPN18-202ENST00000347849 GLG1Q92896 1179 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 HES6Q96HZ4 224 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 AMFRQ9UKV5 643 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 PTPRJQ12913 1337 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 ZBTB42B2RXF5 422 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 PMM2O15305 246 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 PAEPP09466 180 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 NAMPTP43490 491 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 SCTRP47872 440 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 CCDC62Q6P9F0 684 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 TRAPPC12Q8WVT3 735 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 SEC14L1Q92503 715 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 ZNF668Q96K58 619 aaPredicted RBP22.79■■□□□ 1.24
PTPN18-202ENST00000347849 AGPAT1Q99943 283 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 COQ4Q9Y3A0 265 aa22.79■■□□□ 1.24
PTPN18-202ENST00000347849 K7ERI5 159 aa22.78■■□□□ 1.24
PTPN18-202ENST00000347849 CYP26A1O43174 497 aa22.78■■□□□ 1.24
PTPN18-202ENST00000347849 TNFAIP3P21580 790 aa22.78■■□□□ 1.24
PTPN18-202ENST00000347849 COPB2P35606 906 aa22.78■■□□□ 1.24
PTPN18-202ENST00000347849 SNCBQ16143 134 aa22.78■■□□□ 1.24
PTPN18-202ENST00000347849 SLC47A2Q86VL8 602 aa22.78■■□□□ 1.24
PTPN18-202ENST00000347849 CEP57Q86XR8 500 aa22.78■■□□□ 1.24
PTPN18-202ENST00000347849 LRRC71Q8N4P6 559 aa22.78■■□□□ 1.24
PTPN18-202ENST00000347849 TMC2Q8TDI7 906 aa22.78■■□□□ 1.24
PTPN18-202ENST00000347849 PRPF31Q8WWY3 499 aaKnown RBP22.78■■□□□ 1.24
PTPN18-202ENST00000347849 FMO2Q99518 471 aa22.78■■□□□ 1.24
PTPN18-202ENST00000347849 THAP2Q9H0W7 228 aa22.78■■□□□ 1.24
PTPN18-202ENST00000347849 NRBP2Q9NSY0 501 aa22.78■■□□□ 1.24
PTPN18-202ENST00000347849 CHORDC1Q9UHD1 332 aaPredicted RBP22.78■■□□□ 1.24
PTPN18-202ENST00000347849 CAND2O75155 1236 aa22.77■■□□□ 1.24
PTPN18-202ENST00000347849 SF3A3Q12874 501 aaKnown RBP eCLIP22.77■■□□□ 1.243e-11■■■■■ 32.6
PTPN18-202ENST00000347849 PCDHB18PQ96TA0 734 aa22.77■■□□□ 1.24
PTPN18-202ENST00000347849 RAB20Q9NX57 234 aa22.77■■□□□ 1.24
PTPN18-202ENST00000347849 ANKFY1Q9P2R3 1169 aa22.77■■□□□ 1.24
PTPN18-202ENST00000347849 A0A0A6YYK5 440 aaPredicted RBP22.77■■□□□ 1.24
PTPN18-202ENST00000347849 GJB1P08034 283 aa22.77■■□□□ 1.24
PTPN18-202ENST00000347849 RFX1P22670 979 aa22.77■■□□□ 1.24
PTPN18-202ENST00000347849 POU5F1Q01860 360 aaKnown RBP22.77■■□□□ 1.24
PTPN18-202ENST00000347849 STRN3Q13033 797 aa22.77■■□□□ 1.24
PTPN18-202ENST00000347849 FAM160B1Q5W0V3 765 aa22.77■■□□□ 1.24
PTPN18-202ENST00000347849 NOP9Q86U38 636 aaKnown RBP22.77■■□□□ 1.24
PTPN18-202ENST00000347849 FBXL13Q8NEE6 735 aa22.77■■□□□ 1.24
PTPN18-202ENST00000347849 PSPC1Q8WXF1 523 aaKnown RBP22.77■■□□□ 1.24
PTPN18-202ENST00000347849 SPATA33Q96N06 139 aa22.77■■□□□ 1.24
PTPN18-202ENST00000347849 BUB1BO60566 1050 aaPredicted RBP22.76■■□□□ 1.23
PTPN18-202ENST00000347849 MAFO75444 373 aaPredicted RBP22.76■■□□□ 1.23
PTPN18-202ENST00000347849 CHRNB2P17787 502 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 DRD4P21917 467 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 GPC3P51654 580 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 DHX30Q7L2E3 1194 aaKnown RBP eCLIP22.76■■□□□ 1.23
PTPN18-202ENST00000347849 FAM71AQ8IYT1 594 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 GIMAP7Q8NHV1 300 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 SLC35G2Q8TBE7 412 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 AGO2Q9UKV8 859 aaKnown RBP22.76■■□□□ 1.23
PTPN18-202ENST00000347849 EXTL3O43909 919 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 PREPLQ4J6C6 727 aaPredicted RBP22.76■■□□□ 1.23
PTPN18-202ENST00000347849 FAM228AQ86W67 206 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 RPUSD2Q8IZ73 545 aaKnown RBP22.76■■□□□ 1.23
PTPN18-202ENST00000347849 ATP8B4Q8TF62 1192 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 SGSM3Q96HU1 749 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 MS4A4AQ96JQ5 239 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 SCLT1Q96NL6 688 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 MROH8Q9H579 483 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 AZI2Q9H6S1 392 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 STYXL1Q9Y6J8 313 aa22.76■■□□□ 1.23
PTPN18-202ENST00000347849 NOP56O00567 594 aaKnown RBP22.75■■□□□ 1.23
PTPN18-202ENST00000347849 PPFIA2O75334 1257 aa22.75■■□□□ 1.23
PTPN18-202ENST00000347849 SHBGP04278 402 aa22.75■■□□□ 1.23
PTPN18-202ENST00000347849 TXNP10599 105 aaKnown RBP22.75■■□□□ 1.23
PTPN18-202ENST00000347849 HARSP12081 509 aaKnown RBP22.75■■□□□ 1.23
PTPN18-202ENST00000347849 PAXIP1Q6ZW49 1069 aaPredicted RBP22.75■■□□□ 1.23
PTPN18-202ENST00000347849 DHX37Q8IY37 1157 aaKnown RBP22.75■■□□□ 1.23
PTPN18-202ENST00000347849 EPS8L1Q8TE68 723 aa22.75■■□□□ 1.23
PTPN18-202ENST00000347849 CCT6BQ92526 530 aa22.75■■□□□ 1.23
PTPN18-202ENST00000347849 CHMP6Q96FZ7 201 aa22.75■■□□□ 1.23
PTPN18-202ENST00000347849 NOCTQ9UK39 431 aaKnown RBP22.75■■□□□ 1.23
PTPN18-202ENST00000347849 COG5Q9UP83 839 aa22.75■■□□□ 1.23
PTPN18-202ENST00000347849 TLDC2A0PJX2 215 aa22.75■■□□□ 1.23
PTPN18-202ENST00000347849 RFC5P40937 340 aa22.75■■□□□ 1.23
PTPN18-202ENST00000347849 ERMARDQ5T6L9 678 aa22.75■■□□□ 1.23
PTPN18-202ENST00000347849 SHC3Q92529 594 aa22.75■■□□□ 1.23
PTPN18-202ENST00000347849 TLCD1Q96CP7 247 aa22.75■■□□□ 1.23
PTPN18-202ENST00000347849 XPO6Q96QU8 1125 aaKnown RBP22.75■■□□□ 1.23
PTPN18-202ENST00000347849 BTBD19C9JJ37 291 aa22.74■■□□□ 1.23
PTPN18-202ENST00000347849 PDHXO00330 501 aa22.74■■□□□ 1.23
PTPN18-202ENST00000347849 SRGAP2CP0DJJ0 459 aa22.74■■□□□ 1.23
PTPN18-202ENST00000347849 LACTB2Q53H82 288 aaPredicted RBP22.74■■□□□ 1.23
PTPN18-202ENST00000347849 C15orf39Q6ZRI6 1047 aa22.74■■□□□ 1.23
PTPN18-202ENST00000347849 RAB17Q9H0T7 212 aa22.74■■□□□ 1.23
PTPN18-202ENST00000347849 CNOT10Q9H9A5 744 aaKnown RBP22.74■■□□□ 1.23
PTPN18-202ENST00000347849 INTUQ9ULD6 942 aa22.74■■□□□ 1.23
PTPN18-202ENST00000347849 TPX2Q9ULW0 747 aaKnown RBP22.74■■□□□ 1.23
PTPN18-202ENST00000347849 H0YCG3 227 aa22.74■■□□□ 1.23
PTPN18-202ENST00000347849 EIF3BP55884 814 aaKnown RBP22.74■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms