RNA–Protein interactions for RNA: ENST00000344129.2

CT55-202, Transcript of cancer/testis antigen 55, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CT55, Length 1,728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CT55-202ENST00000344129 RRAGDQ9NQL2 400 aaPredicted RBP13.67□□□□□ -0.22
CT55-202ENST00000344129 C1orf112Q9NSG2 853 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 AIPL1Q9NZN9 384 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 CITO14578 2027 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 MEIS3P2A8K0S8 358 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 ITGB3P05106 788 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 SERPING1P05155 500 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 ZSCAN20P17040 1043 aaPredicted RBP13.67□□□□□ -0.22
CT55-202ENST00000344129 RFX1P22670 979 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 MFAP3P55082 362 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 NOP14P78316 857 aaKnown RBP13.67□□□□□ -0.22
CT55-202ENST00000344129 CDK17Q00537 523 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 KLHL30Q0D2K2 578 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 TRIM60Q495X7 471 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 LRRC8DQ7L1W4 858 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 IRF2BP2Q7Z5L9 587 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 CCAR2Q8N163 923 aaKnown RBP13.67□□□□□ -0.22
CT55-202ENST00000344129 LPPQ93052 612 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 SEZ6LQ9BYH1 1024 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 CHST12Q9NRB3 414 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 FAM105AQ9NUU6 356 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 SPTLC3Q9NUV7 552 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 SIX4Q9UIU6 781 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 MYO6Q9UM54 1294 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 NUB1Q9Y5A7 615 aa13.67□□□□□ -0.22
CT55-202ENST00000344129 EVI5O60447 810 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 ZC3H11AO75152 810 aaKnown RBP eCLIP13.66□□□□□ -0.22
CT55-202ENST00000344129 SELPP16109 830 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 GJA8P48165 433 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 DSC3Q14574 896 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 ALKAL1Q6UXT8 129 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 CD302Q8IX05 232 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 RNF169Q8NCN4 708 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 CAGE1Q8TC20 777 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 C18orf25Q96B23 403 aaPredicted RBP13.66□□□□□ -0.22
CT55-202ENST00000344129 CCDC42Q96M95 316 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 ADAM2Q99965 735 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 DEF6Q9H4E7 631 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 HAUS4Q9H6D7 363 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 PLEKHA5Q9HAU0 1116 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 DPP3Q9NY33 737 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 TUBGCP4Q9UGJ1 667 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 PPP2R2CQ9Y2T4 447 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 DAAM1Q9Y4D1 1078 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 EPN1Q9Y6I3 576 aaPredicted RBP13.66□□□□□ -0.22
CT55-202ENST00000344129 TRIP11Q15643 1979 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 RALGAPA2Q2PPJ7 1873 aa13.66□□□□□ -0.22
CT55-202ENST00000344129 A0A0U1RQJ8 604 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 TLR3O15455 904 aaKnown RBP13.65□□□□□ -0.22
CT55-202ENST00000344129 NDUFA10O95299 355 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 ASS1P00966 412 aaKnown RBP13.65□□□□□ -0.22
CT55-202ENST00000344129 FERP16591 822 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 POLR2BP30876 1174 aaKnown RBP13.65□□□□□ -0.22
CT55-202ENST00000344129 KCNJ6P48051 423 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 TLE2Q04725 743 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 BFSP2Q13515 415 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 ZNF699Q32M78 642 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 ATRIPQ8WXE1 791 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 IMPG2Q9BZV3 1241 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 CNTN3Q9P232 1028 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 ATP11BQ9Y2G3 1177 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 C2CD2Q9Y426 696 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 ADGRG1Q9Y653 693 aa13.65□□□□□ -0.22
CT55-202ENST00000344129 SMIM28A0A1B0GU29 152 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 AKR1B10O60218 316 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 ZNF500O60304 480 aaPredicted RBP13.64□□□□□ -0.23
CT55-202ENST00000344129 CALCAP01258 141 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 COL6A1P12109 1028 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 ITGA4P13612 1032 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 CYLC1P35663 651 aaPredicted RBP13.64□□□□□ -0.23
CT55-202ENST00000344129 KIF11P52732 1056 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 CYP27A1Q02318 531 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 PTK2Q05397 1052 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 CUL2Q13617 745 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 SGSM1Q2NKQ1 1148 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 SCARA5Q6ZMJ2 495 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 ZNF571Q7Z3V5 609 aaPredicted RBP13.64□□□□□ -0.23
CT55-202ENST00000344129 USP38Q8NB14 1042 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 CXorf38Q8TB03 319 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 PAWRQ96IZ0 340 aaKnown RBP13.64□□□□□ -0.23
CT55-202ENST00000344129 PPP1R13BQ96KQ4 1090 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 ZFP42Q96MM3 310 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.64□□□□□ -0.23
CT55-202ENST00000344129 IFIH1Q9BYX4 1025 aaKnown RBP13.64□□□□□ -0.23
CT55-202ENST00000344129 XYLT2Q9H1B5 865 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 ACP6Q9NPH0 428 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 POLIQ9UNA4 740 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 AGAP1Q9UPQ3 857 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 REXO2Q9Y3B8 237 aaKnown RBP13.64□□□□□ -0.23
CT55-202ENST00000344129 SQORQ9Y6N5 450 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 DCDC2CA8MYV0 355 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 PPEF2O14830 753 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 CYP26A1O43174 497 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 NBNO60934 754 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 KRT5P13647 590 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 GCNT1Q02742 428 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 GFPT1Q06210 699 aaPredicted RBP13.64□□□□□ -0.23
CT55-202ENST00000344129 FAAP100Q0VG06 881 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 ANKRD33Q7Z3H0 272 aa13.64□□□□□ -0.23
CT55-202ENST00000344129 CCDC170Q8IYT3 715 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms