RNA–Protein interactions for RNA: ENST00000341394.8

CAPRIN1-201, Transcript of cell cycle associated protein 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CAPRIN1, Length 4,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPRIN1-201ENST00000341394 MROH8Q9H579 483 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 CPA4Q9UI42 421 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 DOCK3Q8IZD9 2030 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 LRRD1A4D1F6 860 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 LRRIQ4A6NIV6 560 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 MAFGO15525 162 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 DKC1O60832 514 aaKnown RBP eCLIP11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 PPFIA2O75334 1257 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 KCNJ6P48051 423 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 ALDH5A1P51649 535 aaPredicted RBP11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 RAD23BP54727 409 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 BFSP1Q12934 665 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 CLUL1Q15846 466 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 CCDC137Q6PK04 289 aaKnown RBP11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 PADI6Q6TGC4 694 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 B3GNT9Q6UX72 402 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 METTL13Q8N6R0 699 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 MSANTD4Q8NCY6 345 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 BRI3BPQ8WY22 251 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 PRCCQ92733 491 aaPredicted RBP11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 ZBTB10Q96DT7 871 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 FAM84AQ96KN4 292 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 CEP170P1Q96L14 293 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 IWS1Q96ST2 819 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 REEP2Q9BRK0 252 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 RUSC1Q9BVN2 902 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 CALN1Q9BXU9 219 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 ACP6Q9NPH0 428 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 SPATS2LQ9NUQ6 558 aaKnown RBP11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 NXF1Q9UBU9 619 aaKnown RBP11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 SEPT9Q9UHD8 586 aaPredicted RBP11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 USP20Q9Y2K6 914 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 CLDN3O15551 220 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 SFNP31947 248 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 PEX3P56589 373 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 COG7P83436 770 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 OVGP1Q12889 678 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 TTI2Q6NXR4 508 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 MIS18BP1Q6P0N0 1132 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 LRRC34Q8IZ02 419 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 SYT2Q8N9I0 419 aaPredicted RBP11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 DNERQ8NFT8 737 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 HSD17B14Q9BPX1 270 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 PORCNQ9H237 461 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 ZWILCHQ9H900 591 aa11.12□□□□□ -0.63
CAPRIN1-201ENST00000341394 CIB2O75838 187 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 EPHB1P54762 984 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 PSMC5P62195 406 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 CDO1Q16878 200 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 NIPA1Q7RTP0 329 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 RPUSD2Q8IZ73 545 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 RSAD2Q8WXG1 361 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 TGS1Q96RS0 853 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 C11orf70Q9BRQ4 267 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 CNTRLQ7Z7A1 2325 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 SOX11P35716 441 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 PSMC2P35998 433 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 PDE6CP51160 858 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 KCNA1Q09470 495 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 PSMD2Q13200 908 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 TBX2Q13207 712 aaPredicted RBP11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 UGCGQ16739 394 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 GEN1Q17RS7 908 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 NXNQ6DKJ4 435 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 IL31Q6EBC2 164 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 TMEM139Q8IV31 216 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 SLC35G2Q8TBE7 412 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 RAPGEF5Q92565 580 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 CYP4F11Q9HBI6 524 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 METTL5Q9NRN9 209 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 CFLARO15519 480 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 ATP5DP30049 168 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 NSFP46459 744 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 GCLCP48506 637 aaPredicted RBP11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 SMTNP53814 917 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 GHRHRQ02643 423 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 TTMPQ5BVD1 217 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 CYB5D1Q6P9G0 228 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 CCDC33Q8N5R6 958 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 SEPT10Q9P0V9 454 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 CEP72Q9P209 647 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 PCDHA2Q9Y5H9 948 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 LAMA3Q16787 3333 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 GGPS1O95749 300 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 GNA14O95837 355 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 YWHABP31946 246 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 NUMBP49757 651 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 NPEPPSP55786 919 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 MTERF2Q49AM1 385 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 PLA2G4FQ68DD2 849 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 RINT1Q6NUQ1 792 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 STAMBPL1Q96FJ0 436 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.11□□□□□ -0.636e-9■□□□□ 9.3
CAPRIN1-201ENST00000341394 PARVGQ9HBI0 331 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 LARSQ9P2J5 1176 aaKnown RBP11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 PCSK1NQ9UHG2 260 aa11.11□□□□□ -0.63
CAPRIN1-201ENST00000341394 CYP26A1O43174 497 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 PLS3P13797 630 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 UCHL3P15374 230 aa11.1□□□□□ -0.63
CAPRIN1-201ENST00000341394 TRPC3Q13507 836 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms