RNA–Protein interactions for RNA: ENST00000341060.3

TDP2-201, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TDP2, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-201ENST00000341060 ZNF317Q96PQ6 595 aaPredicted RBP15.53■□□□□ 0.08
TDP2-201ENST00000341060 FNBP1Q96RU3 617 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 TRIM7Q9C029 511 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 ADAMTS5Q9UNA0 930 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 STYXL1Q9Y6J8 313 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 H0YHG0 523 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 NSFP46459 744 aaKnown RBP15.53■□□□□ 0.08
TDP2-201ENST00000341060 IFI35P80217 286 aaPredicted RBP15.53■□□□□ 0.08
TDP2-201ENST00000341060 TDRD10Q5VZ19 366 aaKnown RBP15.53■□□□□ 0.08
TDP2-201ENST00000341060 RHBDF2Q6PJF5 856 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 MON1BQ7L1V2 547 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 SUGP1Q8IWZ8 645 aaKnown RBP15.53■□□□□ 0.08
TDP2-201ENST00000341060 SCYL3Q8IZE3 742 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 DDX27Q96GQ7 796 aaKnown RBP15.53■□□□□ 0.08
TDP2-201ENST00000341060 SELENOSQ9BQE4 189 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 ROPN1BQ9BZX4 212 aaPredicted RBP15.53■□□□□ 0.08
TDP2-201ENST00000341060 CDC42EP4Q9H3Q1 356 aaKnown RBP15.53■□□□□ 0.08
TDP2-201ENST00000341060 ROPN1Q9HAT0 212 aaPredicted RBP15.53■□□□□ 0.08
TDP2-201ENST00000341060 AS3MTQ9HBK9 375 aa15.53■□□□□ 0.08
TDP2-201ENST00000341060 HLA-DRAP01903 254 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 C4BPAP04003 597 aaKnown RBP15.52■□□□□ 0.08
TDP2-201ENST00000341060 TNNI1P19237 187 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 ITIH2P19823 946 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 RPS12P25398 132 aaKnown RBP15.52■□□□□ 0.08
TDP2-201ENST00000341060 SP4Q02446 784 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 PTP4A2Q12974 167 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 AUHQ13825 339 aaKnown RBP15.52■□□□□ 0.08
TDP2-201ENST00000341060 PTK6Q13882 451 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 EMC2Q15006 297 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 XKR3Q5GH77 459 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 LMBRD2Q68DH5 695 aaPredicted RBP15.52■□□□□ 0.08
TDP2-201ENST00000341060 CCDC13Q8IYE1 715 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 ZNF280CQ8ND82 737 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 GRK7Q8WTQ7 553 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 SNF8Q96H20 258 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 OSBPL7Q9BZF2 842 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 CCDC134Q9H6E4 229 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 AAASQ9NRG9 546 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 CHST7Q9NS84 486 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 CYP39A1Q9NYL5 469 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 WDR90Q96KV7 1748 aa15.52■□□□□ 0.08
TDP2-201ENST00000341060 IVDP26440 423 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 DSG3P32926 999 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 PIK3CAP42336 1068 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 WNT7BP56706 349 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 NLRP11P59045 1033 aaKnown RBP15.52■□□□□ 0.07
TDP2-201ENST00000341060 STRN3Q13033 797 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 LLGL1Q15334 1064 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 GNPTABQ3T906 1256 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 MTERF2Q49AM1 385 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 NBPF12Q5TAG4 269 aaPredicted RBP15.52■□□□□ 0.07
TDP2-201ENST00000341060 MIS18BP1Q6P0N0 1132 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 TAOK1Q7L7X3 1001 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 CCDC25Q86WR0 208 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 UHMK1Q8TAS1 419 aaKnown RBP15.52■□□□□ 0.07
TDP2-201ENST00000341060 P3H4Q92791 437 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 C12orf42Q96LP6 360 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 ACTR5Q9H9F9 607 aaPredicted RBP15.52■□□□□ 0.07
TDP2-201ENST00000341060 ASIC3Q9UHC3 531 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 HACL1Q9UJ83 578 aa15.52■□□□□ 0.07
TDP2-201ENST00000341060 AGO2Q9UKV8 859 aaKnown RBP15.52■□□□□ 0.07
TDP2-201ENST00000341060 UMODL1Q5DID0 1318 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 LTBP3Q9NS15 1303 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 SPATA31C2B4DYI2 1134 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 ATP2A1O14983 1001 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 GAS8O95995 478 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 SUPT20HL2P0C7V6 817 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 PTPRAP18433 802 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 ACO1P21399 889 aaKnown RBP15.51■□□□□ 0.07
TDP2-201ENST00000341060 HNRNPH1P31943 449 aaKnown RBP15.51■□□□□ 0.07
TDP2-201ENST00000341060 SLCO1A2P46721 670 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 KLF1Q13351 362 aaPredicted RBP15.51■□□□□ 0.07
TDP2-201ENST00000341060 SNX1Q13596 522 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 SUPT20HL1Q3ZLR7 823 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 DCAF15Q66K64 600 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 KCNV1Q6PIU1 500 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 DHX30Q7L2E3 1194 aaKnown RBP eCLIP15.51■□□□□ 0.07
TDP2-201ENST00000341060 BBXQ8WY36 941 aaPredicted RBP15.51■□□□□ 0.07
TDP2-201ENST00000341060 ATG4AQ8WYN0 398 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 HERPUD2Q9BSE4 406 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 DCLK3Q9C098 648 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 A1CFQ9NQ94 594 aaKnown RBP15.51■□□□□ 0.07
TDP2-201ENST00000341060 GJA3Q9Y6H8 435 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 PTPRJQ12913 1337 aa15.51■□□□□ 0.07
TDP2-201ENST00000341060 PSTPIP1O43586 416 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 PROSCO94903 275 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 VNN1O95497 513 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 PIGRP01833 764 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 ACOT2P49753 483 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 POLGP54098 1239 aaPredicted RBP15.5■□□□□ 0.07
TDP2-201ENST00000341060 HMGCS2P54868 508 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 TMEM132BQ14DG7 1078 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 ICE2Q659A1 982 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 CRELD2Q6UXH1 353 aaPredicted RBP15.5■□□□□ 0.07
TDP2-201ENST00000341060 TRIM72Q6ZMU5 477 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 VCPIP1Q96JH7 1222 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 CEP89Q96ST8 783 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 ACAD9Q9H845 621 aa15.5■□□□□ 0.07
TDP2-201ENST00000341060 INTS9Q9NV88 658 aaKnown RBP15.5■□□□□ 0.07
TDP2-201ENST00000341060 ZNF112Q9UJU3 913 aa15.5■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms