RNA–Protein interactions for RNA: ENST00000340829.9

CDK13-202, Transcript of cyclin dependent kinase 13, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDK13, Length 5,066 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK13-202ENST00000340829 APOBEC2Q9Y235 224 aaKnown RBP20.42■□□□□ 0.86
CDK13-202ENST00000340829 MOCS2O96007 188 aaPredicted RBP20.42■□□□□ 0.86
CDK13-202ENST00000340829 MTM1Q13496 603 aa20.42■□□□□ 0.86
CDK13-202ENST00000340829 GPAT2Q6NUI2 795 aa20.42■□□□□ 0.86
CDK13-202ENST00000340829 RIC1Q4ADV7 1423 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 SPECC1L-ADORA2AF8WAN1 911 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 ARFIP2P53365 341 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 CDK17Q00537 523 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 PAPD7Q5XG87 772 aaKnown RBP20.41■□□□□ 0.86
CDK13-202ENST00000340829 TRIM67Q6ZTA4 783 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 DHX38Q92620 1227 aaKnown RBP20.41■□□□□ 0.86
CDK13-202ENST00000340829 VCX3AQ9NNX9 186 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 BNIP3LO60238 219 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 COG7P83436 770 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 KYNUQ16719 465 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 KYAT1Q16773 422 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 MYCBPQ99417 103 aaPredicted RBP20.41■□□□□ 0.86
CDK13-202ENST00000340829 DNAJC5Q9H3Z4 198 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 NEU2Q9Y3R4 380 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 NFIBO00712 420 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 LRRN4CLQ8ND94 238 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 CASKIN2Q8WXE0 1202 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 WDR35Q9P2L0 1181 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 EZH2Q15910 746 aaKnown RBP20.41■□□□□ 0.86
CDK13-202ENST00000340829 C2CD6Q53TS8 623 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 CARD9Q9H257 536 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 BFARQ9NZS9 450 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 PPP1R9AQ9ULJ8 1098 aa20.41■□□□□ 0.86
CDK13-202ENST00000340829 VEGFAP15692 232 aaPredicted RBP20.4■□□□□ 0.86
CDK13-202ENST00000340829 XPAP23025 273 aaPredicted RBP20.4■□□□□ 0.86
CDK13-202ENST00000340829 PIGHQ14442 188 aaPredicted RBP20.4■□□□□ 0.86
CDK13-202ENST00000340829 PID1Q7Z2X4 250 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 NUDCD3Q8IVD9 361 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 CEP120Q8N960 986 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 ECT2Q9H8V3 914 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 UBN1Q9NPG3 1134 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 MAP3K7O43318 606 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 PAMP19021 973 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 MX2P20592 715 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 R3HDM1Q15032 1099 aaKnown RBP20.4■□□□□ 0.86
CDK13-202ENST00000340829 SMTNL2Q2TAL5 461 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 NOP53Q9NZM5 478 aaKnown RBP20.4■□□□□ 0.86
CDK13-202ENST00000340829 H3BRJ5 948 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 CDH16O75309 829 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 BRD2P25440 801 aaKnown RBP20.4■□□□□ 0.86
CDK13-202ENST00000340829 COPS2P61201 443 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 ACTN3Q08043 901 aaPredicted RBP20.4■□□□□ 0.86
CDK13-202ENST00000340829 EFCAB12Q6NXP0 572 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 ZNF571Q7Z3V5 609 aaPredicted RBP20.4■□□□□ 0.86
CDK13-202ENST00000340829 DUSP9Q99956 384 aaKnown RBP20.4■□□□□ 0.86
CDK13-202ENST00000340829 GTF3C4Q9UKN8 822 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 DYNC1LI2O43237 492 aaPredicted RBP20.4■□□□□ 0.86
CDK13-202ENST00000340829 PDGFRBP09619 1106 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 ZNF720Q7Z2F6 126 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 TNIP3Q96KP6 325 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 NIF3L1Q9GZT8 377 aa20.4■□□□□ 0.86
CDK13-202ENST00000340829 APRTP07741 180 aa20.39■□□□□ 0.86
CDK13-202ENST00000340829 LSP1P33241 339 aa20.39■□□□□ 0.86
CDK13-202ENST00000340829 SEC24CP53992 1094 aa20.39■□□□□ 0.86
CDK13-202ENST00000340829 SRLQ86TD4 932 aa20.39■□□□□ 0.86
CDK13-202ENST00000340829 CHST13Q8NET6 341 aa20.39■□□□□ 0.86
CDK13-202ENST00000340829 RDM1Q8NG50 284 aa20.39■□□□□ 0.86
CDK13-202ENST00000340829 TBRG4Q969Z0 631 aaKnown RBP eCLIP20.39■□□□□ 0.86
CDK13-202ENST00000340829 FAM49BQ9NUQ9 324 aa20.39■□□□□ 0.86
CDK13-202ENST00000340829 TPX2Q9ULW0 747 aaKnown RBP20.39■□□□□ 0.86
CDK13-202ENST00000340829 IRAK1P51617 712 aa20.39■□□□□ 0.85
CDK13-202ENST00000340829 SESN2P58004 480 aaPredicted RBP20.39■□□□□ 0.85
CDK13-202ENST00000340829 MDM2Q00987 491 aaPredicted RBP20.39■□□□□ 0.85
CDK13-202ENST00000340829 WDR93Q6P2C0 686 aa20.39■□□□□ 0.85
CDK13-202ENST00000340829 C4orf33Q8N1A6 199 aa20.39■□□□□ 0.85
CDK13-202ENST00000340829 IL17RAQ96F46 866 aa20.39■□□□□ 0.85
CDK13-202ENST00000340829 ATP5HO75947 161 aa20.39■□□□□ 0.85
CDK13-202ENST00000340829 SKIP12755 728 aa20.39■□□□□ 0.85
CDK13-202ENST00000340829 TCF7P36402 384 aaPredicted RBP20.39■□□□□ 0.85
CDK13-202ENST00000340829 ITGA8P53708 1063 aa20.39■□□□□ 0.85
CDK13-202ENST00000340829 TBX2Q13207 712 aaPredicted RBP20.39■□□□□ 0.85
CDK13-202ENST00000340829 GRIK5Q16478 980 aa20.39■□□□□ 0.85
CDK13-202ENST00000340829 SPDL1Q96EA4 605 aa20.39■□□□□ 0.85
CDK13-202ENST00000340829 RAB6BQ9NRW1 208 aa20.39■□□□□ 0.85
CDK13-202ENST00000340829 CHUKO15111 745 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 RALAP11233 206 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 NPTX2P47972 431 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 OCRLQ01968 901 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 ATXN7L3BQ96GX2 97 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 POP1Q99575 1024 aaKnown RBP20.38■□□□□ 0.85
CDK13-202ENST00000340829 DMGDHQ9UI17 866 aaKnown RBP20.38■□□□□ 0.85
CDK13-202ENST00000340829 ANGPTL2Q9UKU9 493 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 BAG5Q9UL15 447 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 MYO5BQ9ULV0 1848 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 MEFVO15553 781 aaPredicted RBP20.38■□□□□ 0.85
CDK13-202ENST00000340829 RARBP10826 455 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 ZFXP17010 805 aaPredicted RBP20.38■□□□□ 0.85
CDK13-202ENST00000340829 CYP4A22Q5TCH4 519 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 CCNYL1Q8N7R7 359 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 SDCCAG3Q96C92 435 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 ZSWIM1Q9BR11 485 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 FGFR1OP2Q9NVK5 253 aa20.38■□□□□ 0.85
CDK13-202ENST00000340829 LRRIQ3A6PVS8 624 aaPredicted RBP20.38■□□□□ 0.85
CDK13-202ENST00000340829 RPS12P25398 132 aaKnown RBP20.38■□□□□ 0.85
CDK13-202ENST00000340829 HSD17B3P37058 310 aa20.38■□□□□ 0.85
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms