RNA–Protein interactions for RNA: ENST00000340027.9

NCR3-201, Transcript of natural cytotoxicity triggering receptor 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NCR3, Length 1,042 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCR3-201ENST00000340027 PTPRJQ12913 1337 aa16.13■□□□□ 0.17
NCR3-201ENST00000340027 CITO14578 2027 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 RALGAPA2Q2PPJ7 1873 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 HLA-DRAP01903 254 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 CYP3A5P20815 502 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 MYO1EQ12965 1108 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 GRIK3Q13003 919 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 TRIM14Q14142 442 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 PTPN21Q16825 1174 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 SGSM1Q2NKQ1 1148 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 ZNF365Q70YC5 407 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 CACNA2D4Q7Z3S7 1137 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 VSTM4Q8IW00 320 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 SPC24Q8NBT2 197 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 TAS1R2Q8TE23 839 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 IQCDQ96DY2 449 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 ZMAT2Q96NC0 199 aaKnown RBP16.12■□□□□ 0.17
NCR3-201ENST00000340027 MRPL9Q9BYD2 267 aaKnown RBP16.12■□□□□ 0.17
NCR3-201ENST00000340027 FAM207AQ9NSI2 230 aaPredicted RBP16.12■□□□□ 0.17
NCR3-201ENST00000340027 AGAP1Q9UPQ3 857 aa16.12■□□□□ 0.17
NCR3-201ENST00000340027 TBKBP1A7MCY6 615 aa16.11■□□□□ 0.17
NCR3-201ENST00000340027 MEFVO15553 781 aaPredicted RBP16.11■□□□□ 0.17
NCR3-201ENST00000340027 PTMAP06454 111 aaKnown RBP16.11■□□□□ 0.17
NCR3-201ENST00000340027 SLC9A1P19634 815 aa16.11■□□□□ 0.17
NCR3-201ENST00000340027 PON1P27169 355 aa16.11■□□□□ 0.17
NCR3-201ENST00000340027 POLR2BP30876 1174 aaKnown RBP16.11■□□□□ 0.17
NCR3-201ENST00000340027 WDR5P61964 334 aaKnown RBP16.11■□□□□ 0.17
NCR3-201ENST00000340027 LRMPQ12912 555 aa16.11■□□□□ 0.17
NCR3-201ENST00000340027 ZNF699Q32M78 642 aa16.11■□□□□ 0.17
NCR3-201ENST00000340027 EPC2Q52LR7 807 aa16.11■□□□□ 0.17
NCR3-201ENST00000340027 C15orf39Q6ZRI6 1047 aa16.11■□□□□ 0.17
NCR3-201ENST00000340027 ZNF397Q8NF99 534 aaPredicted RBP16.11■□□□□ 0.17
NCR3-201ENST00000340027 C18orf25Q96B23 403 aaPredicted RBP16.11■□□□□ 0.17
NCR3-201ENST00000340027 FAM84AQ96KN4 292 aa16.11■□□□□ 0.17
NCR3-201ENST00000340027 NT5C1BQ96P26 610 aa16.11■□□□□ 0.17
NCR3-201ENST00000340027 UTP3Q9NQZ2 479 aaKnown RBP eCLIP16.11■□□□□ 0.17
NCR3-201ENST00000340027 TUBGCP4Q9UGJ1 667 aa16.11■□□□□ 0.17
NCR3-201ENST00000340027 ITIH6Q6UXX5 1313 aa16.11■□□□□ 0.17
NCR3-201ENST00000340027 DNAH12Q6ZR08 3092 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 PTGESO14684 152 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 ZC3H11AO75152 810 aaKnown RBP eCLIP16.1■□□□□ 0.17
NCR3-201ENST00000340027 P4HA1P13674 534 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 ATICP31939 592 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 GUCY2FP51841 1108 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 CCDC173Q0VFZ6 552 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 KCNMA1Q12791 1236 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 ZBTB6Q15916 424 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 CLLU1OSQ5K130 101 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 FAM117BQ6P1L5 589 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 TRIM65Q6PJ69 517 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 C1orf127Q8N9H9 656 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 CPLX3Q8WVH0 158 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 TAF4BQ92750 862 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 FAM81BQ96LP2 452 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 ZNF560Q96MR9 790 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 UROC1Q96N76 676 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 PPP1R10Q96QC0 940 aaKnown RBP16.1■□□□□ 0.17
NCR3-201ENST00000340027 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.1■□□□□ 0.17
NCR3-201ENST00000340027 ZBED2Q9BTP6 218 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 CXCL16Q9H2A7 254 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 MIOSQ9NXC5 875 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 PCDH10Q9P2E7 1040 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 COQ4Q9Y3A0 265 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 ANK1P16157 1881 aa16.1■□□□□ 0.17
NCR3-201ENST00000340027 VNN1O95497 513 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 CST3P01034 146 aaPredicted RBP16.09■□□□□ 0.17
NCR3-201ENST00000340027 PBX1P40424 430 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 PNPLA4P41247 253 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 KLK7P49862 253 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 MYL6P60660 151 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 TUSC3Q13454 348 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 TSR1Q2NL82 804 aaKnown RBP16.09■□□□□ 0.17
NCR3-201ENST00000340027 PAN2Q504Q3 1202 aaKnown RBP16.09■□□□□ 0.17
NCR3-201ENST00000340027 ZNF667Q5HYK9 610 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 TMEM240Q5SV17 173 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 SPOUT1Q5T280 376 aaKnown RBP16.09■□□□□ 0.17
NCR3-201ENST00000340027 PPM1KQ8N3J5 372 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 SEMA4DQ92854 862 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 TOP1MTQ969P6 601 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 DDX27Q96GQ7 796 aaKnown RBP16.09■□□□□ 0.17
NCR3-201ENST00000340027 SPAG5Q96R06 1193 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 PI4K2AQ9BTU6 479 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 PLCB1Q9NQ66 1216 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 IMPACTQ9P2X3 320 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 APEX2Q9UBZ4 518 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 SIK3Q9Y2K2 1263 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 DAAM1Q9Y4D1 1078 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 SLC4A7Q9Y6M7 1214 aa16.09■□□□□ 0.17
NCR3-201ENST00000340027 MICAL3Q7RTP6 2002 aa16.08■□□□□ 0.16
NCR3-201ENST00000340027 CASTOR2A6NHX0 329 aa16.08■□□□□ 0.16
NCR3-201ENST00000340027 INPPL1O15357 1258 aa16.08■□□□□ 0.16
NCR3-201ENST00000340027 RFX1P22670 979 aa16.08■□□□□ 0.16
NCR3-201ENST00000340027 RPL9P32969 192 aaKnown RBP16.08■□□□□ 0.16
NCR3-201ENST00000340027 MFAP3P55082 362 aa16.08■□□□□ 0.16
NCR3-201ENST00000340027 POLR2FP61218 127 aaKnown RBP16.08■□□□□ 0.16
NCR3-201ENST00000340027 TNNC1P63316 161 aa16.08■□□□□ 0.16
NCR3-201ENST00000340027 DEFB103AP81534 67 aa16.08■□□□□ 0.16
NCR3-201ENST00000340027 RAPGEF1Q13905 1077 aa16.08■□□□□ 0.16
NCR3-201ENST00000340027 SV2CQ496J9 727 aa16.08■□□□□ 0.16
NCR3-201ENST00000340027 KLHDC7AQ5VTJ3 777 aa16.08■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms