RNA–Protein interactions for RNA: ENST00000339570.9

SCARB1-202, Transcript of scavenger receptor class B member 1, humanhuman

TSL 5 BASIC

Gene SCARB1, Length 3,329 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-202ENST00000339570 SEL1LQ9UBV2 794 aa17.14■□□□□ 0.34
SCARB1-202ENST00000339570 GTF3C4Q9UKN8 822 aa17.14■□□□□ 0.34
SCARB1-202ENST00000339570 PHTF1Q9UMS5 762 aa17.14■□□□□ 0.34
SCARB1-202ENST00000339570 ADSSP30520 456 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 RPA3P35244 121 aaPredicted RBP17.14■□□□□ 0.33
SCARB1-202ENST00000339570 RARRES1P49788 294 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 CDR2Q01850 454 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 GPS1Q13098 491 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 SPP2Q13103 211 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 PPP2R5CQ13362 524 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 HHIPL2Q6UWX4 724 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 BTNL9Q6UXG8 535 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 CCDC77Q9BR77 488 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 RXFP1Q9HBX9 757 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 RAB20Q9NX57 234 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 TELO2Q9Y4R8 837 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 MAGEA4P43358 317 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 IL9RQ01113 521 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 KRT39Q6A163 491 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 LONP2Q86WA8 852 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 ANKLE1Q8NAG6 615 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 PSPC1Q8WXF1 523 aaKnown RBP17.14■□□□□ 0.33
SCARB1-202ENST00000339570 FAXDC2Q96IV6 333 aa17.14■□□□□ 0.33
SCARB1-202ENST00000339570 L3MBTL3Q96JM7 780 aaPredicted RBP17.14■□□□□ 0.33
SCARB1-202ENST00000339570 A0A0G2JND7 137 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 ECE2O60344 883 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 ITIH2P19823 946 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 ZNF268Q14587 947 aaPredicted RBP17.13■□□□□ 0.33
SCARB1-202ENST00000339570 HHATQ5VTY9 493 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 PCNX4Q63HM2 1172 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 SCARA3Q6AZY7 606 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 TMEM270Q6UE05 265 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 DTX3LQ8TDB6 740 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 KIFAP3Q92845 792 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 LRRC37BQ96QE4 947 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 UBN1Q9NPG3 1134 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 POLRMTO00411 1230 aaKnown RBP17.13■□□□□ 0.33
SCARB1-202ENST00000339570 ATP5DP30049 168 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 NRLP54845 237 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 STRN3Q13033 797 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 CRYMQ14894 314 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 ACAD10Q6JQN1 1059 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 MIS18BP1Q6P0N0 1132 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 FBXL13Q8NEE6 735 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 TRABDQ9H4I3 376 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 TMEM206Q9H813 350 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 ATP9AO75110 1047 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 SMAD1Q15797 465 aaKnown RBP17.13■□□□□ 0.33
SCARB1-202ENST00000339570 NBPF20Q3BBV1 942 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 MDH1BQ5I0G3 518 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 CAPRIN2Q6IMN6 1127 aaKnown RBP17.13■□□□□ 0.33
SCARB1-202ENST00000339570 UTP4Q969X6 686 aaKnown RBP17.13■□□□□ 0.33
SCARB1-202ENST00000339570 NUDCD1Q96RS6 583 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 TRAIPQ9BWF2 469 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 PPP1R12CQ9BZL4 782 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 LRRC19Q9H756 370 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 RAVER2Q9HCJ3 691 aaKnown RBP17.13■□□□□ 0.33
SCARB1-202ENST00000339570 DNPEPQ9ULA0 475 aa17.13■□□□□ 0.33
SCARB1-202ENST00000339570 MROH7Q68CQ1 1323 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 ARSEP51690 589 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 SMTNL2Q2TAL5 461 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 ATL2Q8NHH9 583 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 LRRC8CQ8TDW0 803 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 OSBPL8Q9BZF1 889 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 ROPN1BQ9BZX4 212 aaPredicted RBP17.12■□□□□ 0.33
SCARB1-202ENST00000339570 ROPN1Q9HAT0 212 aaPredicted RBP17.12■□□□□ 0.33
SCARB1-202ENST00000339570 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.12■□□□□ 0.33
SCARB1-202ENST00000339570 CDH16O75309 829 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 RAD17O75943 681 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 IVDP26440 423 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 CPA2P48052 419 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 HELQQ8TDG4 1101 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 ZDHHC15Q96MV8 337 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 EBF2Q9HAK2 575 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 KMT5AQ9NQR1 393 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 ANKFY1Q9P2R3 1169 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 GRID1Q9ULK0 1009 aa17.12■□□□□ 0.33
SCARB1-202ENST00000339570 ZBTB12Q9Y330 459 aaPredicted RBP17.12■□□□□ 0.33
SCARB1-202ENST00000339570 FAM47DPA6NHR8 397 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 SGK1O00141 431 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 CYP1A2P05177 515 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 SLC1A5Q15758 541 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 GNPTABQ3T906 1256 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 CERKQ8TCT0 537 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 PARD3BQ8TEW8 1205 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 SHC3Q92529 594 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 GMCL1Q96IK5 515 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 TMEM121Q9BTD3 319 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 WHRNQ9P202 907 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 CHKBQ9Y259 395 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 NEU2Q9Y3R4 380 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 NHSQ6T4R5 1651 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 EME2A4GXA9 379 aaPredicted RBP17.11■□□□□ 0.33
SCARB1-202ENST00000339570 FSCN2O14926 492 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 CCND1P24385 295 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 RPL7AP62424 266 aaKnown RBP17.11■□□□□ 0.33
SCARB1-202ENST00000339570 TMEM63BQ5T3F8 832 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 MFSD5Q6N075 450 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 TEX2Q8IWB9 1127 aa17.11■□□□□ 0.33
SCARB1-202ENST00000339570 ZNF668Q96K58 619 aaPredicted RBP17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms