RNA–Protein interactions for RNA: ENST00000338862.5

PCDH8-201, Transcript of protocadherin 8, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PCDH8, Length 3,708 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH8-201ENST00000338862 SCYL2Q6P3W7 929 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 OGFOD1Q8N543 542 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 CHURC1Q8WUH1 139 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 CFAP36Q96G28 342 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 SMYD3Q9H7B4 428 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 RXFP1Q9HBX9 757 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 OLFML3Q9NRN5 406 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 KCNH7Q9NS40 1196 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 ZMYND8Q9ULU4 1186 aaPredicted RBP15□□□□□ -0.01
PCDH8-201ENST00000338862 ZHX2Q9Y6X8 837 aa15□□□□□ -0.01
PCDH8-201ENST00000338862 LAMB4A4D0S4 1761 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 A0A1W2PPM1 405 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 E2F8A0AVK6 867 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 BTNL10A8MVZ5 291 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 ADRB2P07550 413 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 YWHABP31946 246 aaKnown RBP14.99□□□□□ -0.01
PCDH8-201ENST00000338862 ORC1Q13415 861 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 MTMR1Q13613 665 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 LACTB2Q53H82 288 aaPredicted RBP14.99□□□□□ -0.01
PCDH8-201ENST00000338862 CFAP157Q5JU67 520 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP14.99□□□□□ -0.01
PCDH8-201ENST00000338862 SERPINB12Q96P63 405 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 PPP1R16BQ96T49 567 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 FHDC1Q9C0D6 1143 aaPredicted RBP14.99□□□□□ -0.01
PCDH8-201ENST00000338862 ECM29Q5VYK3 1845 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 C5orf60A6NFR6 353 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 DGKZQ13574 1117 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 PIGWQ7Z7B1 504 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 KREMEN1Q96MU8 473 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 FAM161BQ96MY7 647 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 POLR3CQ9BUI4 534 aaPredicted RBP14.99□□□□□ -0.01
PCDH8-201ENST00000338862 GGA2Q9UJY4 613 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 USP21Q9UK80 565 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 MAD1L1Q9Y6D9 718 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 NUP98P52948 1817 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 CHRNB2P17787 502 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 FOXN2P32314 431 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 PPP2R5DQ14738 602 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 AOC3Q16853 763 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 CDO1Q16878 200 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 EPB41L4BQ9H329 900 aa14.99□□□□□ -0.01
PCDH8-201ENST00000338862 PPARGC1AQ9UBK2 798 aaKnown RBP14.99□□□□□ -0.01
PCDH8-201ENST00000338862 NKX1-2Q9UD57 310 aaPredicted RBP14.99□□□□□ -0.01
PCDH8-201ENST00000338862 MT-ND3P03897 115 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 CYP3A4P08684 503 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 CETPP11597 493 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 FMO1Q01740 532 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 SPIRE1Q08AE8 756 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 CYP4A22Q5TCH4 519 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 WDR78Q5VTH9 848 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 ARHGEF16Q5VV41 709 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 CASC4Q6P4E1 433 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 CDR2LQ86X02 465 aaPredicted RBP14.98□□□□□ -0.01
PCDH8-201ENST00000338862 HSPH1Q92598 858 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 CCDC124Q96CT7 223 aaKnown RBP14.98□□□□□ -0.01
PCDH8-201ENST00000338862 DDX50Q9BQ39 737 aaKnown RBP14.98□□□□□ -0.01
PCDH8-201ENST00000338862 VAV3Q9UKW4 847 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 EIF3DO15371 548 aaKnown RBP eCLIP14.98□□□□□ -0.01
PCDH8-201ENST00000338862 QARSP47897 775 aaKnown RBP14.98□□□□□ -0.01
PCDH8-201ENST00000338862 GCLCP48506 637 aaPredicted RBP14.98□□□□□ -0.01
PCDH8-201ENST00000338862 VSTM1Q6UX27 236 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 SV2AQ7L0J3 742 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 NLRX1Q86UT6 975 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 SLC25A41Q8N5S1 370 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 PARD3BQ8TEW8 1205 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 CKAP2Q8WWK9 683 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 HSD17B14Q9BPX1 270 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 GTF3C4Q9UKN8 822 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 CHMP2BQ9UQN3 213 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 ZBTB12Q9Y330 459 aaPredicted RBP14.98□□□□□ -0.01
PCDH8-201ENST00000338862 AFF2P51816 1311 aa14.98□□□□□ -0.01
PCDH8-201ENST00000338862 GSTA1P08263 222 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 IL1R1P14778 569 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 GABPAQ06546 454 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 MTMR2Q13614 643 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 RCN1Q15293 331 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 HYIQ5T013 277 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 MAIP1Q8WWC4 291 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 ART4Q93070 314 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 ZNF570Q96NI8 536 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 MKNK1Q9BUB5 465 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 ROPN1BQ9BZX4 212 aaPredicted RBP14.97□□□□□ -0.01
PCDH8-201ENST00000338862 ROPN1Q9HAT0 212 aaPredicted RBP14.97□□□□□ -0.01
PCDH8-201ENST00000338862 TUFT1Q9NNX1 390 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 DNPEPQ9ULA0 475 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 PCDHA3Q9Y5H8 950 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 GTPBP10A4D1E9 387 aaKnown RBP14.97□□□□□ -0.01
PCDH8-201ENST00000338862 NFIBO00712 420 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 TBX3O15119 743 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 ENO1P06733 434 aaKnown RBP14.97□□□□□ -0.01
PCDH8-201ENST00000338862 ADRA1DP25100 572 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 GNA15P30679 374 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 POU5F1Q01860 360 aaKnown RBP14.97□□□□□ -0.01
PCDH8-201ENST00000338862 C6orf163Q5TEZ5 329 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 FAXCQ5TGI0 409 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 EEPD1Q7L9B9 569 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 TRAF3IP1Q8TDR0 691 aaPredicted RBP14.97□□□□□ -0.01
PCDH8-201ENST00000338862 LENG9Q96B70 501 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 MCEEQ96PE7 176 aa14.97□□□□□ -0.01
PCDH8-201ENST00000338862 HEY2Q9UBP5 337 aa14.97□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 77 ms