RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 C16orf72Q14CZ0 275 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 CLEC10AQ8IUN9 316 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 CKAP2Q8WWK9 683 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 KRT35Q92764 455 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 CEP95Q96GE4 821 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 REEP2Q9BRK0 252 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 HAUS8Q9BT25 410 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 VPS11Q9H270 941 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 OLFML3Q9NRN5 406 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 BSDC1Q9NW68 430 aaPredicted RBP13.98□□□□□ -0.17
COL2A1-201ENST00000337299 BTBD7Q9P203 1132 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 APEX2Q9UBZ4 518 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 PCSK1NQ9UHG2 260 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 MROH1Q8NDA8 1641 aa13.98□□□□□ -0.17
COL2A1-201ENST00000337299 FOXN3O00409 490 aaPredicted RBP13.97□□□□□ -0.17
COL2A1-201ENST00000337299 DGKIO75912 1065 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 RALAP11233 206 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 ATP2B4P23634 1241 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 CACNB3P54284 484 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 IL1RL1Q01638 556 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 RASA2Q15283 850 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 SLFN13Q68D06 897 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 MCUQ8NE86 351 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 WDR60Q8WVS4 1066 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 EME1Q96AY2 570 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 DCUN1D5Q9BTE7 237 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 TMEM120AQ9BXJ8 343 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 PALMDQ9NP74 551 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 PNPLA7Q6ZV29 1317 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 TLR3O15455 904 aaKnown RBP13.97□□□□□ -0.17
COL2A1-201ENST00000337299 PSMG1O95456 288 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 ENO3P13929 434 aaPredicted RBP13.97□□□□□ -0.17
COL2A1-201ENST00000337299 MMP13P45452 471 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 GCLCP48506 637 aaPredicted RBP13.97□□□□□ -0.17
COL2A1-201ENST00000337299 RAB27AP51159 221 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 ZNF268Q14587 947 aaPredicted RBP13.97□□□□□ -0.17
COL2A1-201ENST00000337299 ZBTB46Q86UZ6 589 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 DEPDC1BQ8WUY9 529 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 CPA5Q8WXQ8 436 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 CDKL2Q92772 493 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 EFHD1Q9BUP0 239 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 TCP10L2B9ZVM9 353 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 NEMP1O14524 444 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 ASPRV1Q53RT3 343 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 KIAA2013Q8IYS2 634 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 PYDC1Q8WXC3 89 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 BAP1Q92560 729 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 ACSF2Q96CM8 615 aaPredicted RBP13.97□□□□□ -0.17
COL2A1-201ENST00000337299 CATSPER2Q96P56 530 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 BTBD10Q9BSF8 475 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 PICK1Q9NRD5 415 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 NARFQ9UHQ1 456 aa13.97□□□□□ -0.17
COL2A1-201ENST00000337299 ZC3H13Q5T200 1668 aaKnown RBP13.96□□□□□ -0.17
COL2A1-201ENST00000337299 MEI4A8MW99 385 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 SLC37A4O43826 429 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 RTN2O75298 545 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 CRCPO75575 148 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 FESP07332 822 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 LIG4P49917 911 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 PPIDQ08752 370 aaKnown RBP13.96□□□□□ -0.17
COL2A1-201ENST00000337299 MTFR1Q15390 333 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 TRIM67Q6ZTA4 783 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 CYFIP1Q7L576 1253 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 ZNF354CQ86Y25 554 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 SLC5A5Q92911 643 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 SENP7Q9BQF6 1050 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 RSPH10B2B2RC85 870 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 DDX3XO00571 662 aaKnown RBP eCLIP13.96□□□□□ -0.176e-12■■■□□ 16.5
COL2A1-201ENST00000337299 RSPH10BP0C881 870 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 PKN2Q16513 984 aaKnown RBP13.96□□□□□ -0.17
COL2A1-201ENST00000337299 IL17AQ16552 155 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 LRRC6Q86X45 466 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 POU5F2Q8N7G0 328 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 KCTD6Q8NC69 237 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 SPOCK2Q92563 424 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 HSPH1Q92598 858 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 EPAS1Q99814 870 aa13.96□□□□□ -0.17
COL2A1-201ENST00000337299 MRPL1Q9BYD6 325 aaKnown RBP13.96□□□□□ -0.17
COL2A1-201ENST00000337299 DMAP1Q9NPF5 467 aaPredicted RBP13.96□□□□□ -0.17
COL2A1-201ENST00000337299 CLRN2A0PK11 232 aa13.96□□□□□ -0.18
COL2A1-201ENST00000337299 AOC3Q16853 763 aa13.96□□□□□ -0.18
COL2A1-201ENST00000337299 ARMCX6Q7L4S7 300 aa13.96□□□□□ -0.18
COL2A1-201ENST00000337299 SLC20A1Q8WUM9 679 aa13.96□□□□□ -0.18
COL2A1-201ENST00000337299 GRIP2Q9C0E4 1043 aa13.96□□□□□ -0.18
COL2A1-201ENST00000337299 PIDD1Q9HB75 910 aa13.96□□□□□ -0.18
COL2A1-201ENST00000337299 SLC5A4Q9NY91 659 aa13.96□□□□□ -0.18
COL2A1-201ENST00000337299 CNOT7Q9UIV1 285 aaKnown RBP13.96□□□□□ -0.18
COL2A1-201ENST00000337299 USP17L10C9JJH3 530 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 PDXKO00764 312 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 KLRC4O43908 158 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 PYGMP11217 842 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 VAMP7P51809 220 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 KLC3Q6P597 504 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 RHOT1Q8IXI2 618 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 ARHGEF26Q96DR7 871 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 TRIM11Q96F44 468 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 ATXN7L3BQ96GX2 97 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 RBM41Q96IZ5 413 aaKnown RBP13.95□□□□□ -0.18
COL2A1-201ENST00000337299 PFDN4Q9NQP4 134 aa13.95□□□□□ -0.18
COL2A1-201ENST00000337299 AIPL1Q9NZN9 384 aa13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms