RNA–Protein interactions for RNA: ENST00000336520.7

MRPL55-203, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 744 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-203ENST00000336520 GTF3C5Q9Y5Q8 519 aaPredicted RBP12.36□□□□□ -0.43
MRPL55-203ENST00000336520 MUC3AQ02505 3323 aa12.36□□□□□ -0.43
MRPL55-203ENST00000336520 TTC26A0AVF1 554 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 FAM86C2PA6NEL3 165 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 LACTBL1A8MY62 500 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 TISP43B9A030 160 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 XPOTO43592 962 aaKnown RBP12.35□□□□□ -0.43
MRPL55-203ENST00000336520 FAM189A1O60320 539 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 C1RP00736 705 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 IGFBP6P24592 240 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-203ENST00000336520 MCM4P33991 863 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 ASIC1P78348 528 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 ALCAMQ13740 583 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 E2F4Q16254 413 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 L1TD1Q5T7N2 865 aaKnown RBP12.35□□□□□ -0.43
MRPL55-203ENST00000336520 LIN9Q5TKA1 542 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 C15orf39Q6ZRI6 1047 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 ANKS3Q6ZW76 656 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 SYCP3Q8IZU3 236 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 TDRD5Q8NAT2 981 aaKnown RBP12.35□□□□□ -0.43
MRPL55-203ENST00000336520 KREMEN2Q8NCW0 462 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 CMASQ8NFW8 434 aaPredicted RBP12.35□□□□□ -0.43
MRPL55-203ENST00000336520 HDAC7Q8WUI4 952 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 POMGNT1Q8WZA1 660 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 CLSTN3Q9BQT9 956 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 PIDD1Q9HB75 910 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 OLFML3Q9NRN5 406 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 AGO2Q9UKV8 859 aaKnown RBP12.35□□□□□ -0.43
MRPL55-203ENST00000336520 UBQLN1Q9UMX0 589 aaKnown RBP12.35□□□□□ -0.43
MRPL55-203ENST00000336520 PCDHB13Q9Y5F0 798 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 PLXNA3P51805 1871 aa12.35□□□□□ -0.43
MRPL55-203ENST00000336520 CCDC195A0A1B0GUA6 201 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 FRMD3A2A2Y4 597 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 TULP1O00294 542 aaPredicted RBP12.34□□□□□ -0.43
MRPL55-203ENST00000336520 POLR2DO15514 142 aaKnown RBP12.34□□□□□ -0.43
MRPL55-203ENST00000336520 RFPL2O75678 378 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 PPP1R37O75864 691 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 OR1D2P34982 312 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 ACOT2P49753 483 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 KRT85P78386 507 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 KCNA1Q09470 495 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 POSTNQ15063 836 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 RESP18Q5W5W9 173 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 LILRA6Q6PI73 481 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 CD300LGQ6UXG3 332 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 CCDC149Q6ZUS6 474 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 STXBP4Q6ZWJ1 553 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 CD302Q8IX05 232 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 SMG7Q92540 1137 aaKnown RBP12.34□□□□□ -0.43
MRPL55-203ENST00000336520 TSPAN18Q96SJ8 248 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 TRIM9Q9C026 710 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 IKZF4Q9H2S9 585 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 MAGEF1Q9HAY2 307 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 KBTBD4Q9NVX7 518 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 MTRRQ9UBK8 725 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 CPSF3Q9UKF6 684 aaKnown RBP12.34□□□□□ -0.43
MRPL55-203ENST00000336520 RCOR1Q9UKL0 485 aa12.34□□□□□ -0.43
MRPL55-203ENST00000336520 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-203ENST00000336520 C2CD4DB7Z1M9 353 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 SYN3O14994 580 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 ADAM12O43184 909 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 CYP3A5P20815 502 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 CASP5P51878 434 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 TMEM132DQ14C87 1099 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 VARS2Q5ST30 1063 aaKnown RBP12.33□□□□□ -0.44
MRPL55-203ENST00000336520 JADE1Q6IE81 842 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 CYP26C1Q6V0L0 522 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 OTOP3Q7RTS5 596 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 APPL2Q8NEU8 664 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 BEST2Q8NFU1 509 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 FEZF2Q8TBJ5 459 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 NOC3LQ8WTT2 800 aaKnown RBP12.33□□□□□ -0.44
MRPL55-203ENST00000336520 ACSF2Q96CM8 615 aaPredicted RBP12.33□□□□□ -0.44
MRPL55-203ENST00000336520 SUSD3Q96L08 255 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 SPATA32Q96LK8 384 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 PYM1Q9BRP8 204 aaKnown RBP12.33□□□□□ -0.44
MRPL55-203ENST00000336520 LRFN3Q9BTN0 628 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 STRA6Q9BX79 667 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 ZDHHC7Q9NXF8 308 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 FBXW11Q9UKB1 542 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 ZDHHC9Q9Y397 364 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 ATP6V1DQ9Y5K8 247 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 BACE2Q9Y5Z0 518 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 CDY1Q9Y6F8 540 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 STYXL1Q9Y6J8 313 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 PDCD11Q14690 1871 aaKnown RBP12.33□□□□□ -0.44
MRPL55-203ENST00000336520 VWA8A3KMH1 1905 aa12.33□□□□□ -0.44
MRPL55-203ENST00000336520 H7C4K7 107 aa12.32□□□□□ -0.44
MRPL55-203ENST00000336520 GPR37L1O60883 481 aa12.32□□□□□ -0.44
MRPL55-203ENST00000336520 ZMYND10O75800 440 aa12.32□□□□□ -0.44
MRPL55-203ENST00000336520 PRPF6O94906 941 aaKnown RBP12.32□□□□□ -0.44
MRPL55-203ENST00000336520 C8AP07357 584 aa12.32□□□□□ -0.44
MRPL55-203ENST00000336520 NFICP08651 508 aa12.32□□□□□ -0.44
MRPL55-203ENST00000336520 LRPAP1P30533 357 aa12.32□□□□□ -0.44
MRPL55-203ENST00000336520 GUCY2FP51841 1108 aa12.32□□□□□ -0.44
MRPL55-203ENST00000336520 ARPP19P56211 112 aa12.32□□□□□ -0.44
MRPL55-203ENST00000336520 RAB33AQ14088 237 aa12.32□□□□□ -0.44
MRPL55-203ENST00000336520 ZBTB6Q15916 424 aa12.32□□□□□ -0.44
MRPL55-203ENST00000336520 PPM1LQ5SGD2 360 aa12.32□□□□□ -0.44
MRPL55-203ENST00000336520 CEP57L1Q8IYX8 460 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms