RNA–Protein interactions for RNA: ENST00000333896.5

SPTBN1-201, Transcript of spectrin beta, non-erythrocytic 1, humanhuman

TSL 1 (best) BASIC

Gene SPTBN1, Length 9,075 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN1-201ENST00000333896 GJA10Q969M2 543 aa10.84□□□□□ -0.67
SPTBN1-201ENST00000333896 VPS11Q9H270 941 aa10.84□□□□□ -0.67
SPTBN1-201ENST00000333896 PI4K2BQ8TCG2 481 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 IFT43Q96FT9 208 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 RMND5BQ96G75 393 aaPredicted RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 PCDHGB4Q9UN71 923 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 CLIC4Q9Y696 253 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 EMILIN1Q9Y6C2 1016 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 CYP19A1P11511 503 aaPredicted RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 ZNF827Q17R98 1081 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 ZNF280DQ6N043 979 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 GLMNQ92990 594 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 LBHD1Q9BQE6 289 aaPredicted RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 NDST4Q9H3R1 872 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 RERGLQ9H628 205 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 XPO5Q9HAV4 1204 aaKnown RBP eCLIP10.83□□□□□ -0.683e-6■■■□□ 16
SPTBN1-201ENST00000333896 AFF4Q9UHB7 1163 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 APPL1Q9UKG1 709 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 PCDH11XQ9BZA7 1347 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 GRIN2BQ13224 1484 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 TSPOAP1O95153 1857 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 C5orf58C9J3I9 102 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 TEX28O15482 410 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 OR52Z1P0C646 297 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 FLT3P36888 993 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 COX10Q12887 443 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 SHROOM1Q2M3G4 852 aaPredicted RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 MICU2Q8IYU8 434 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 ABCA9Q8IUA7 1624 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 SPDYE5A6NIY4 337 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 RAD51BO15315 384 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 SRGAP2O75044 1071 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 TCP10Q12799 353 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 ALCAMQ13740 583 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 SPDYE7PQ495Y7 208 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 IZUMO2Q6UXV1 221 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 PLEKHG3A1L390 1219 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 BTN3A3O00478 584 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 ATP6V1G1O75348 118 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 DDX5P17844 614 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 IL12AP29459 219 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 STK4Q13043 487 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 C7orf31Q8N865 590 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 COX4I2Q96KJ9 171 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 EGFL8Q99944 293 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 PAIP1Q9H074 479 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 MAP3K20Q9NYL2 800 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 TMEM120BA0PK00 339 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 SFI1A8K8P3 1242 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 PSMA3P25788 255 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 TARSP26639 723 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 FNTAP49354 379 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 ARL13BQ3SXY8 428 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 SPDYAQ5MJ70 313 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 CCDC137Q6PK04 289 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 NSMFQ6X4W1 530 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 DENND6AQ8IWF6 608 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 NDUFAF2Q8N183 169 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 KIF2BQ8N4N8 673 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 SHCBP1Q8NEM2 672 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 NGLY1Q96IV0 654 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 NT5C1BQ96P26 610 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 SERPINB13Q9UIV8 391 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 RAB21Q9UL25 225 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 GPC6Q9Y625 555 aaPredicted RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 PCDH11YQ9BZA8 1340 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 ARHGEF37A1IGU5 675 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 GPAA1O43292 621 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 NR1H2P55055 460 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 CSE1LP55060 971 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 METTL23Q86XA0 190 aa10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 GSPT2Q8IYD1 628 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 RNASE11Q8TAA1 199 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 ZC3H7BQ9UGR2 993 aaKnown RBP10.83□□□□□ -0.68
SPTBN1-201ENST00000333896 QRICH2Q9H0J4 1663 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 PIPSLA2A3N6 862 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 CENPXA8MT69 81 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 BNIPLQ7Z465 357 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 GALNT15Q8N3T1 639 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 S100A6P06703 90 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 PSMC2P35998 433 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 RFC5P40937 340 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 ATXN3P54252 364 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 PKN3Q6P5Z2 889 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 ACSBG1Q96GR2 724 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 FRMPD2Q68DX3 1309 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 SKAP2O75563 359 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 CHN2P52757 468 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 PTGDRQ13258 359 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 FAM45BPQ6NSW5 357 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 TAF2Q6P1X5 1199 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 CCDC36Q8IYA8 594 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 PIH1D3Q9NQM4 214 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 NPM3O75607 178 aaKnown RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 MYOM2P54296 1465 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 XRCC4Q13426 336 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 SH2D3CQ8N5H7 860 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 CCDC33Q8N5R6 958 aa10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 ZNF713Q8N859 430 aaPredicted RBP10.82□□□□□ -0.68
SPTBN1-201ENST00000333896 EIF1ADQ8N9N8 165 aaKnown RBP10.82□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms