RNA–Protein interactions for RNA: ENST00000331563.6

PKP3-201, Transcript of plakophilin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PKP3, Length 2,809 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-201ENST00000331563 DDX50Q9BQ39 737 aaKnown RBP19.28■□□□□ 0.68
PKP3-201ENST00000331563 ZSWIM1Q9BR11 485 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 DNAJC12Q9UKB3 198 aa19.28■□□□□ 0.68
PKP3-201ENST00000331563 ATP8B3O60423 1300 aa19.27■□□□□ 0.68
PKP3-201ENST00000331563 FAM47DPA6NHR8 397 aa19.27■□□□□ 0.68
PKP3-201ENST00000331563 ZNF189O75820 626 aaPredicted RBP19.27■□□□□ 0.68
PKP3-201ENST00000331563 TJP3O95049 919 aa19.27■□□□□ 0.68
PKP3-201ENST00000331563 ZCCHC18P0CG32 403 aa19.27■□□□□ 0.68
PKP3-201ENST00000331563 PYGMP11217 842 aa19.27■□□□□ 0.68
PKP3-201ENST00000331563 PTPN4P29074 926 aa19.27■□□□□ 0.68
PKP3-201ENST00000331563 ADCY7P51828 1080 aa19.27■□□□□ 0.68
PKP3-201ENST00000331563 RBM26Q5T8P6 1007 aaKnown RBP19.27■□□□□ 0.68
PKP3-201ENST00000331563 MIGA2Q7L4E1 593 aa19.27■□□□□ 0.68
PKP3-201ENST00000331563 RIOX1Q9H6W3 641 aa19.27■□□□□ 0.68
PKP3-201ENST00000331563 ANKRD62A6NC57 917 aa19.27■□□□□ 0.67
PKP3-201ENST00000331563 KRT36O76013 467 aa19.27■□□□□ 0.67
PKP3-201ENST00000331563 NOVP48745 357 aa19.27■□□□□ 0.67
PKP3-201ENST00000331563 KRT17Q04695 432 aa19.27■□□□□ 0.67
PKP3-201ENST00000331563 ZNF543Q08ER8 600 aa19.27■□□□□ 0.67
PKP3-201ENST00000331563 PALB2Q86YC2 1186 aa19.27■□□□□ 0.67
PKP3-201ENST00000331563 ARHGAP18Q8N392 663 aa19.27■□□□□ 0.67
PKP3-201ENST00000331563 CCDC77Q9BR77 488 aa19.27■□□□□ 0.67
PKP3-201ENST00000331563 RHBDL2Q9NX52 303 aa19.27■□□□□ 0.67
PKP3-201ENST00000331563 LRRN2O75325 713 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 TMCC1O94876 653 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 CYP11B2P19099 503 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 EIF4BP23588 611 aaKnown RBP19.26■□□□□ 0.67
PKP3-201ENST00000331563 BAG6P46379 1132 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 ZC2HC1CQ53FD0 456 aaPredicted RBP19.26■□□□□ 0.67
PKP3-201ENST00000331563 LRRC74BQ6ZQY2 392 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 C1orf54Q8WWF1 131 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 METTL14Q9HCE5 456 aaKnown RBP19.26■□□□□ 0.67
PKP3-201ENST00000331563 AAASQ9NRG9 546 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 PI4KBQ9UBF8 816 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 SLC4A7Q9Y6M7 1214 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 FOCADQ5VW36 1801 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 MAP3K7O43318 606 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 SPOPO43791 374 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 CDH16O75309 829 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 DLATP10515 647 aaKnown RBP19.26■□□□□ 0.67
PKP3-201ENST00000331563 COMTP21964 271 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 WDR4P57081 412 aaKnown RBP19.26■□□□□ 0.67
PKP3-201ENST00000331563 DSTYKQ6XUX3 929 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 C4orf50Q6ZRC1 276 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 RNF207Q6ZRF8 634 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 CEP128Q6ZU80 1094 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 ZNF365Q70YC5 407 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 SIAH1Q8IUQ4 282 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 RHOT2Q8IXI1 618 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 SLC35C1Q96A29 364 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 PWWP2AQ96N64 755 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 KDM3AQ9Y4C1 1321 aa19.26■□□□□ 0.67
PKP3-201ENST00000331563 NR3C1P04150 777 aa19.25■□□□□ 0.67
PKP3-201ENST00000331563 USP46P62068 366 aa19.25■□□□□ 0.67
PKP3-201ENST00000331563 RNF168Q8IYW5 571 aaPredicted RBP19.25■□□□□ 0.67
PKP3-201ENST00000331563 LZICQ8WZA0 190 aa19.25■□□□□ 0.67
PKP3-201ENST00000331563 NCSTNQ92542 709 aa19.25■□□□□ 0.67
PKP3-201ENST00000331563 MCUR1Q96AQ8 359 aa19.25■□□□□ 0.67
PKP3-201ENST00000331563 CSRNP1Q96S65 589 aa19.25■□□□□ 0.67
PKP3-201ENST00000331563 TSPYL2Q9H2G4 693 aaPredicted RBP19.25■□□□□ 0.67
PKP3-201ENST00000331563 GGPS1O95749 300 aa19.25■□□□□ 0.67
PKP3-201ENST00000331563 CETPP11597 493 aa19.25■□□□□ 0.67
PKP3-201ENST00000331563 LMNB2Q03252 620 aa19.25■□□□□ 0.67
PKP3-201ENST00000331563 HS2ST1Q7LGA3 356 aa19.25■□□□□ 0.67
PKP3-201ENST00000331563 SLC13A5Q86YT5 568 aaPredicted RBP19.25■□□□□ 0.67
PKP3-201ENST00000331563 SCYL3Q8IZE3 742 aa19.25■□□□□ 0.67
PKP3-201ENST00000331563 NRG4Q8WWG1 115 aa19.25■□□□□ 0.67
PKP3-201ENST00000331563 ALAS1P13196 640 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 KPNB1Q14974 876 aaKnown RBP19.24■□□□□ 0.67
PKP3-201ENST00000331563 CNPY1Q3B7I2 92 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 MTDHQ86UE4 582 aaKnown RBP19.24■□□□□ 0.67
PKP3-201ENST00000331563 SFR1Q86XK3 245 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 CCDC125Q86Z20 511 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 ZC3H3Q8IXZ2 948 aaKnown RBP19.24■□□□□ 0.67
PKP3-201ENST00000331563 SH3TC2Q8TF17 1288 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 STK33Q9BYT3 514 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 PDP2Q9P2J9 529 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 GH2P01242 217 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 FTLP02792 175 aaPredicted RBP19.24■□□□□ 0.67
PKP3-201ENST00000331563 CCDC166P0CW27 439 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 SNHG28P0DPA3 235 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 OCRLQ01968 901 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 SLC34A1Q06495 639 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 VPS52Q8N1B4 723 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 UBN1Q9NPG3 1134 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 TRAF3IP3Q9Y228 551 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 ADGRA3Q8IWK6 1321 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 SIGLEC16A6NMB1 481 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 ITGA8P53708 1063 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 SPARCL1Q14515 664 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 PRUNE1Q86TP1 453 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 C9orf72Q96LT7 481 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 NPHS2Q9NP85 383 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 SERPINA10Q9UK55 444 aa19.24■□□□□ 0.67
PKP3-201ENST00000331563 USP17L15C9J2P7 530 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 USP17L13C9JLJ4 530 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 USP17L11C9JVI0 530 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 USP17L18D6R9N7 530 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 USP17L22D6RA61 530 aa19.23■□□□□ 0.67
PKP3-201ENST00000331563 USP17L17D6RBQ6 530 aa19.23■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms