RNA–Protein interactions for RNA: ENST00000330334.7

HDDC3-201, Transcript of HD domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene HDDC3, Length 1,047 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDDC3-201ENST00000330334 DHX8Q14562 1220 aaKnown RBP19.36■□□□□ 0.69
HDDC3-201ENST00000330334 ZBTB6Q15916 424 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 AXDND1Q5T1B0 1012 aaPredicted RBP19.36■□□□□ 0.69
HDDC3-201ENST00000330334 RSPO2Q6UXX9 243 aaPredicted RBP19.36■□□□□ 0.69
HDDC3-201ENST00000330334 ZNF461Q8TAF7 563 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 C18orf25Q96B23 403 aaPredicted RBP19.36■□□□□ 0.69
HDDC3-201ENST00000330334 BICD1Q96G01 975 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 EPSTI1Q96J88 318 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 FIZ1Q96SL8 496 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 SMOC2Q9H3U7 446 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 STK17AQ9UEE5 414 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 CCDC39Q9UFE4 941 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 FBXO2Q9UK22 296 aaPredicted RBP19.36■□□□□ 0.69
HDDC3-201ENST00000330334 CDY1Q9Y6F8 540 aa19.36■□□□□ 0.69
HDDC3-201ENST00000330334 TRIP11Q15643 1979 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 CACNA1HO95180 2353 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 A0A0B4J269 797 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 ANHXE9PGG2 379 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 HNRNPDLO14979 420 aaKnown RBP19.35■□□□□ 0.69
HDDC3-201ENST00000330334 ABLIM3O94929 683 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 PDGFBP01127 241 aaPredicted RBP19.35■□□□□ 0.69
HDDC3-201ENST00000330334 KRT18P05783 430 aaKnown RBP19.35■□□□□ 0.69
HDDC3-201ENST00000330334 HARSP12081 509 aaKnown RBP19.35■□□□□ 0.69
HDDC3-201ENST00000330334 FSHRP23945 695 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 LIG4P49917 911 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 CLCN5P51795 746 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 VARS2Q5ST30 1063 aaKnown RBP19.35■□□□□ 0.69
HDDC3-201ENST00000330334 PRSS33Q8NF86 280 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 SUSD3Q96L08 255 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 IRF2BPLQ9H1B7 796 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 ZSCAN16Q9H4T2 348 aaPredicted RBP19.35■□□□□ 0.69
HDDC3-201ENST00000330334 MAFFQ9ULX9 164 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 NUB1Q9Y5A7 615 aa19.35■□□□□ 0.69
HDDC3-201ENST00000330334 VWA8A3KMH1 1905 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 H7C4K7 107 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 I3L4J1 428 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 K7ELQ4 463 aaPredicted RBP19.34■□□□□ 0.69
HDDC3-201ENST00000330334 K7ENM7 598 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 OGTO15294 1046 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 FAM189A1O60320 539 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 TBCAO75347 108 aaKnown RBP19.34■□□□□ 0.69
HDDC3-201ENST00000330334 MARCKSP29966 332 aaPredicted RBP19.34■□□□□ 0.69
HDDC3-201ENST00000330334 LRPAP1P30533 357 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 SEZ6Q53EL9 994 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 ASTLQ6HA08 431 aaPredicted RBP19.34■□□□□ 0.69
HDDC3-201ENST00000330334 USP49Q70CQ1 688 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 GRASPQ7Z6J2 395 aaPredicted RBP19.34■□□□□ 0.69
HDDC3-201ENST00000330334 MAP4K3Q8IVH8 894 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 SLC44A3Q8N4M1 653 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 KRI1Q8N9T8 703 aaKnown RBP19.34■□□□□ 0.69
HDDC3-201ENST00000330334 APPL2Q8NEU8 664 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 SLC7A14Q8TBB6 771 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 WNT16Q9UBV4 365 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 KCNH3Q9ULD8 1083 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 MTMR6Q9Y217 621 aa19.34■□□□□ 0.69
HDDC3-201ENST00000330334 MYH11P35749 1972 aa19.33■□□□□ 0.69
HDDC3-201ENST00000330334 ARHGEF37A1IGU5 675 aa19.33■□□□□ 0.68
HDDC3-201ENST00000330334 CXCL8P10145 99 aa19.33■□□□□ 0.68
HDDC3-201ENST00000330334 MATR3P43243 847 aaKnown RBP eCLIP19.33■□□□□ 0.68
HDDC3-201ENST00000330334 POU5F1Q01860 360 aaKnown RBP19.33■□□□□ 0.68
HDDC3-201ENST00000330334 TCF15Q12870 199 aa19.33■□□□□ 0.68
HDDC3-201ENST00000330334 SLC39A14Q15043 492 aa19.33■□□□□ 0.68
HDDC3-201ENST00000330334 TPGS2Q68CL5 300 aa19.33■□□□□ 0.68
HDDC3-201ENST00000330334 CD302Q8IX05 232 aa19.33■□□□□ 0.68
HDDC3-201ENST00000330334 CDH7Q9ULB5 785 aa19.33■□□□□ 0.68
HDDC3-201ENST00000330334 UBQLN1Q9UMX0 589 aaKnown RBP19.33■□□□□ 0.68
HDDC3-201ENST00000330334 CITO14578 2027 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 CCL16O15467 120 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 XPOTO43592 962 aaKnown RBP19.32■□□□□ 0.68
HDDC3-201ENST00000330334 ATF2P15336 505 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 PAX3P23760 479 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 TXLNAP40222 546 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 ROR1Q01973 937 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 PPP2R3AQ06190 1150 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 SPECC1Q5M775 1068 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 RRAGBQ5VZM2 374 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 GET4Q7L5D6 327 aaPredicted RBP19.32■□□□□ 0.68
HDDC3-201ENST00000330334 ZNF720Q7Z2F6 126 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 OXCT2Q9BYC2 517 aaPredicted RBP19.32■□□□□ 0.68
HDDC3-201ENST00000330334 RPF1Q9H9Y2 349 aaKnown RBP19.32■□□□□ 0.68
HDDC3-201ENST00000330334 AVENQ9NQS1 362 aaPredicted RBP19.32■□□□□ 0.68
HDDC3-201ENST00000330334 SEL1LQ9UBV2 794 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 PCDHB8Q9UN66 801 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 STYXL1Q9Y6J8 313 aa19.32■□□□□ 0.68
HDDC3-201ENST00000330334 DOCK8Q8NF50 2099 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 LACTBL1A8MY62 500 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 M0QZQ0 153 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 STX6O43752 255 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 SRFP11831 508 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 PDIA4P13667 645 aaKnown RBP19.31■□□□□ 0.68
HDDC3-201ENST00000330334 MCM4P33991 863 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 AARSP49588 968 aaKnown RBP eCLIP19.31■□□□□ 0.68
HDDC3-201ENST00000330334 HTR4Q13639 388 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 ENOX2Q16206 610 aaKnown RBP19.31■□□□□ 0.68
HDDC3-201ENST00000330334 SLFN12LQ6IEE8 588 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 FAM173BQ6P4H8 233 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 SLC39A4Q6P5W5 647 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 TCEAL8Q8IYN2 117 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 RSAD2Q8WXG1 361 aa19.31■□□□□ 0.68
HDDC3-201ENST00000330334 DDX12PQ92771 950 aa19.31■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms