RNA–Protein interactions for RNA: ENST00000330137.11

SKA2-201, Transcript of spindle and kinetochore associated complex subunit 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SKA2, Length 2,798 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA2-201ENST00000330137 SIX2Q9NPC8 291 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 SPATA7Q9P0W8 599 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 SLC24A2Q9UI40 661 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 ALG6Q9Y672 507 aa8.9□□□□□ -0.99
SKA2-201ENST00000330137 E9PBE3 544 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 PDXKO00764 312 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 FSCN2O14926 492 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 TM9SF1O15321 606 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 CALUO43852 315 aaPredicted RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 CCNT1O60563 726 aaKnown RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 ACSL3O95573 720 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 CHN2P52757 468 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 CDK16Q00536 496 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 DLGAP5Q15398 846 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 SIX1Q15475 284 aaPredicted RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 CLEC16AQ2KHT3 1053 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 TMEM63BQ5T3F8 832 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 SYDE2Q5VT97 1194 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 DHRS4L2Q6PKH6 230 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 CENPUQ71F23 418 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 OTOAQ7RTW8 1153 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 MTDHQ86UE4 582 aaKnown RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 BBS5Q8N3I7 341 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 SYT2Q8N9I0 419 aaPredicted RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 OR6Y1Q8NGX8 325 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 OLIG1Q8TAK6 271 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 LNX1Q8TBB1 728 aaPredicted RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 CD101Q93033 1021 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 VPS50Q96JG6 964 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 TAS2R1Q9NYW7 299 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 NINJ2Q9NZG7 142 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 RTCBQ9Y3I0 505 aaKnown RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 KANSL1LA0AUZ9 987 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 ZNF189O75820 626 aaPredicted RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 TM7SF2O76062 418 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 ESRRAP11474 423 aaPredicted RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 IL2RBP14784 551 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 GTF2H1P32780 548 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 PGM1P36871 562 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 EMP3P54852 163 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 USP41Q3LFD5 358 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 LRRC6Q86X45 466 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 TMEM126BQ8IUX1 230 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 ERMNQ8TAM6 284 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 GAB3Q8WWW8 586 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 JADE3Q92613 823 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 ZNF75CPQ92670 426 aaPredicted RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 CORO1BQ9BR76 489 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 RIOK1Q9BRS2 568 aaKnown RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 YIPF2Q9BWQ6 316 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 MRPS26Q9BYN8 205 aaKnown RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 UNC45AQ9H3U1 944 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 OSGEPQ9NPF4 335 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 RHBDL2Q9NX52 303 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 SAP30BPQ9UHR5 308 aaKnown RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 TELO2Q9Y4R8 837 aa8.89□□□□□ -0.99
SKA2-201ENST00000330137 CTDP1Q9Y5B0 961 aaPredicted RBP8.89□□□□□ -0.99
SKA2-201ENST00000330137 ERVV-2B6SEH9 535 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 PLSCR1O15162 318 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 DENRO43583 198 aaKnown RBP8.88□□□□□ -0.99
SKA2-201ENST00000330137 BUD23O43709 281 aaKnown RBP8.88□□□□□ -0.99
SKA2-201ENST00000330137 TYROBPO43914 113 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 RNASEH1O60930 286 aaKnown RBP8.88□□□□□ -0.99
SKA2-201ENST00000330137 CDK4P11802 303 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 SLC9A1P19634 815 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 IVDP26440 423 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 CCNFP41002 786 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 THOC5Q13769 683 aaKnown RBP8.88□□□□□ -0.99
SKA2-201ENST00000330137 SYCP2LQ5T4T6 812 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 PCNX4Q63HM2 1172 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 DYMQ7RTS9 669 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 SFR1Q86XK3 245 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 SCUBE1Q8IWY4 988 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 CYP4X1Q8N118 509 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 BIRC8Q96P09 236 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 CDCA7Q9BWT1 371 aaPredicted RBP8.88□□□□□ -0.99
SKA2-201ENST00000330137 Q9H521 79 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 TMEM165Q9HC07 324 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 SORCS3Q9UPU3 1222 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 A0A1B0GUL6 1792 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 THSD7AQ9UPZ6 1657 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 TNS2Q63HR2 1409 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 TMEM110-MUSTN1A8MSY1 372 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 ADAMTS3O15072 1205 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 PDE8AO60658 829 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 OPHN1O60890 802 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 MLH1P40692 756 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 CETN2P41208 172 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 NEK3P51956 506 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 CENPCQ03188 943 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 KIF22Q14807 665 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 BMT2Q1RMZ1 405 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 ANKRD20A4Q4UJ75 823 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 Q6ZNX1 250 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 TMEM110Q86TL2 294 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 CCDC25Q86WR0 208 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 SCYL3Q8IZE3 742 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 MARVELD2Q8N4S9 558 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 KCTD17Q8N5Z5 321 aa8.88□□□□□ -0.99
SKA2-201ENST00000330137 UHMK1Q8TAS1 419 aaKnown RBP8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms