RNA–Protein interactions for RNA: ENST00000328300.10

COL4A5-201, Transcript of collagen type IV alpha 5 chain, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene COL4A5, Length 6,483 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A5-201ENST00000328300 DCTN3O75935 186 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 EGFRP00533 1210 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 ITIH2P19823 946 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 C3orf67Q6ZVT6 689 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 WDR49Q8IV35 697 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 TAB3Q8N5C8 712 aaPredicted RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 TTC8Q8TAM2 541 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 RNPC3Q96LT9 517 aaKnown RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 EFHD1Q9BUP0 239 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 ELAVL2Q12926 359 aaKnown RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 ATP8B4Q8TF62 1192 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 WDR18Q9BV38 432 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 CATSPERBQ9H7T0 1116 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 MYO5BQ9ULV0 1848 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 LSM8O95777 96 aaKnown RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 ACOT2P49753 483 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 LIG3P49916 1009 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 HERVK_113P62684 666 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 TRMT10CQ7L0Y3 403 aaKnown RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 GBP5Q96PP8 586 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 SERPINI1Q99574 410 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 PIDD1Q9HB75 910 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 PLAAQ9Y263 795 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 SNX24Q9Y343 169 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 TAF6LQ9Y6J9 622 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 UBE2Q2LH0YL09 131 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 MCF2P10911 925 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 RFC1P35251 1148 aaPredicted RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 GRIK1P39086 918 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 LRIG3Q6UXM1 1119 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 RNF25Q96BH1 459 aaPredicted RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 OPTNQ96CV9 577 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 DDX27Q96GQ7 796 aaKnown RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 TACO1Q9BSH4 297 aaKnown RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 TRAIPQ9BWF2 469 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 GALCP54803 685 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 GIT2Q14161 759 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 UGP2Q16851 508 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 ZNF410Q86VK4 478 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 TSSK1BQ9BXA7 367 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 VIPAS39Q9H9C1 493 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 NOVA2Q9UNW9 492 aaKnown RBP12.05□□□□□ -0.48
COL4A5-201ENST00000328300 STK38LQ9Y2H1 464 aa12.05□□□□□ -0.48
COL4A5-201ENST00000328300 FBXO21O94952 628 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 ZNF235Q14590 738 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 PTPN21Q16825 1174 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 CRLF3Q8IUI8 442 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 WDR75Q8IWA0 830 aaKnown RBP12.04□□□□□ -0.48
COL4A5-201ENST00000328300 PIK3CDO00329 1044 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 TXNDC9O14530 226 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 CUL2Q13617 745 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 TRIP13Q15645 432 aaPredicted RBP12.04□□□□□ -0.48
COL4A5-201ENST00000328300 NBPF9Q3BBW0 867 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 FSCBQ5H9T9 825 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 DNAJC7Q99615 494 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 LBHD1Q9BQE6 289 aaPredicted RBP12.04□□□□□ -0.48
COL4A5-201ENST00000328300 FAM208AQ9UK61 1670 aaKnown RBP12.04□□□□□ -0.48
COL4A5-201ENST00000328300 LOC102724159A0A0B4J2E5 919 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 CREB3O43889 395 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 MED24O75448 989 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 VDRP11473 427 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 SF3A3Q12874 501 aaKnown RBP eCLIP12.04□□□□□ -0.48
COL4A5-201ENST00000328300 PWP2Q15269 919 aaKnown RBP12.04□□□□□ -0.48
COL4A5-201ENST00000328300 BOLA3Q53S33 107 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 NBPF12Q5TAG4 269 aaPredicted RBP12.04□□□□□ -0.48
COL4A5-201ENST00000328300 CABYRO75952 493 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 GZMAP12544 262 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 PDGFRAP16234 1089 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 TMEM119Q4V9L6 283 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 TAF2Q6P1X5 1199 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 HPDLQ96IR7 371 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 RUSC1Q9BVN2 902 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 TRIM15Q9C019 465 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 PSTPIP1O43586 416 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 GPD1P21695 349 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 SERPINB9P50453 376 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 PDK1Q15118 436 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 MUM1Q2TAK8 710 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 CC2D1AQ6P1N0 951 aaPredicted RBP12.04□□□□□ -0.48
COL4A5-201ENST00000328300 SLC35G2Q8TBE7 412 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 ZBTB18Q99592 522 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 PCDHB7Q9Y5E2 793 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 HEY1Q9Y5J3 304 aa12.04□□□□□ -0.48
COL4A5-201ENST00000328300 XRN1Q8IZH2 1706 aaKnown RBP12.03□□□□□ -0.48
COL4A5-201ENST00000328300 GDAP1Q8TB36 358 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 SMYD2Q9NRG4 433 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 IL17RBQ9NRM6 502 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 ZNF212Q9UDV6 495 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 FHOD1Q9Y613 1164 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 DCDC2CA8MYV0 355 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 F9P00740 461 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 REM2Q8IYK8 340 aaPredicted RBP12.03□□□□□ -0.48
COL4A5-201ENST00000328300 GRAMD1AQ96CP6 724 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 FBXO28Q9NVF7 368 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 LMO7Q8WWI1 1683 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 MAPK13O15264 365 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 NPTXRO95502 500 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 CCZ1BP86790 482 aa12.03□□□□□ -0.48
COL4A5-201ENST00000328300 CCZ1P86791 482 aaPredicted RBP12.03□□□□□ -0.48
COL4A5-201ENST00000328300 CENPPQ6IPU0 288 aa12.03□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms