RNA–Protein interactions for RNA: ENST00000326470.9

SSH1-201, Transcript of slingshot protein phosphatase 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SSH1, Length 2,432 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH1-201ENST00000326470 ZC3H12CQ9C0D7 883 aaKnown RBP17.8■□□□□ 0.44
SSH1-201ENST00000326470 CYP39A1Q9NYL5 469 aa17.8■□□□□ 0.44
SSH1-201ENST00000326470 RGS17Q9UGC6 210 aaPredicted RBP17.8■□□□□ 0.44
SSH1-201ENST00000326470 SBDSQ9Y3A5 250 aaKnown RBP eCLIP17.8■□□□□ 0.44
SSH1-201ENST00000326470 A0A1W2PRG0 241 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 ADRB2P07550 413 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 POLR2MP0CAP2 368 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 TARSP26639 723 aaKnown RBP17.79■□□□□ 0.44
SSH1-201ENST00000326470 CALRP27797 417 aaKnown RBP17.79■□□□□ 0.44
SSH1-201ENST00000326470 DNAJC3Q13217 504 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 KLF1Q13351 362 aaPredicted RBP17.79■□□□□ 0.44
SSH1-201ENST00000326470 IZUMO3Q5VZ72 239 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 ZNF365Q70YC5 407 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 TRABD2AQ86V40 505 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 DENND1AQ8TEH3 1009 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 ZNF483Q8TF39 744 aaPredicted RBP17.79■□□□□ 0.44
SSH1-201ENST00000326470 STK32AQ8WU08 396 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 DDX27Q96GQ7 796 aaKnown RBP17.79■□□□□ 0.44
SSH1-201ENST00000326470 ZNF536O15090 1300 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 DCTN3O75935 186 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 SLC18A1P54219 525 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 SNRPFP62306 86 aaKnown RBP17.79■□□□□ 0.44
SSH1-201ENST00000326470 TRAF1Q13077 416 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 CCNG2Q16589 344 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 FAM13CQ8NE31 585 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 ZDHHC15Q96MV8 337 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 FAM167BQ9BTA0 163 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 FOXP3Q9BZS1 431 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 AVENQ9NQS1 362 aaPredicted RBP17.79■□□□□ 0.44
SSH1-201ENST00000326470 ZFATQ9P243 1243 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 HAO1Q9UJM8 370 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 COQ4Q9Y3A0 265 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 ATRNL1Q5VV63 1379 aa17.79■□□□□ 0.44
SSH1-201ENST00000326470 GSTTP1A0A1W2PQM5 241 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 PRPF4O43172 522 aaKnown RBP eCLIP17.78■□□□□ 0.44
SSH1-201ENST00000326470 TPBGLP0DKB5 382 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 PLS3P13797 630 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 MAGEA4P43358 317 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 GPC3P51654 580 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 SPARCL1Q14515 664 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 KRT39Q6A163 491 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 CEP128Q6ZU80 1094 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 PRUNE1Q86TP1 453 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 FAM81BQ96LP2 452 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 KIAA1683Q9H0B3 1180 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 FAM198AQ9UFP1 575 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 MROH7Q68CQ1 1323 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 PPEF1O14829 653 aaPredicted RBP17.78■□□□□ 0.44
SSH1-201ENST00000326470 SPAG7O75391 227 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 VIL1P09327 827 aaKnown RBP17.78■□□□□ 0.44
SSH1-201ENST00000326470 ALDH3A1P30838 453 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 GTF2BQ00403 316 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 PTP4A2Q12974 167 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 DOK7Q18PE1 504 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 ZCCHC9Q8N567 271 aaKnown RBP17.78■□□□□ 0.44
SSH1-201ENST00000326470 ENDOVQ8N8Q3 282 aaKnown RBP17.78■□□□□ 0.44
SSH1-201ENST00000326470 SLC17A8Q8NDX2 589 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 SLC7A6OSQ96CW6 309 aaPredicted RBP17.78■□□□□ 0.44
SSH1-201ENST00000326470 RBM15Q96T37 977 aaKnown RBP eCLIP17.78■□□□□ 0.44
SSH1-201ENST00000326470 OSBPL1AQ9BXW6 950 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 KIF9Q9HAQ2 790 aa17.78■□□□□ 0.44
SSH1-201ENST00000326470 GOLGA8IPA6NC78 632 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 GOLGA8JA6NMD2 632 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 IPO5O00410 1097 aaKnown RBP17.77■□□□□ 0.44
SSH1-201ENST00000326470 LINGO3P0C6S8 592 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 T-ENOLP0DO92 83 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 RALAP11233 206 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 GM2AP17900 193 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 GCAP28676 217 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 GRIPAP1Q4V328 841 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 CMPK2Q5EBM0 449 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 RBM26Q5T8P6 1007 aaKnown RBP17.77■□□□□ 0.44
SSH1-201ENST00000326470 CYP4F22Q6NT55 531 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 HAUS6Q7Z4H7 955 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 TDRPQ86YL5 185 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 MCOLN2Q8IZK6 566 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 SPOCK2Q92563 424 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 CFAP57Q96MR6 1250 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 NT5C1BQ96P26 610 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 TBC1D10AQ9BXI6 508 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 HEMGNQ9BXL5 484 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 IDI2Q9BXS1 227 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 EHMT1Q9H9B1 1298 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 SLCO1B3Q9NPD5 702 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 SMCHD1A6NHR9 2005 aa17.77■□□□□ 0.44
SSH1-201ENST00000326470 LRRC37AA6NMS7 1700 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 EXOC1LA0A1B0GW35 172 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 EDF1O60869 148 aaKnown RBP17.77■□□□□ 0.43
SSH1-201ENST00000326470 GYS1P13807 737 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 RASSF2P50749 326 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 RAD23BP54727 409 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 PDK4Q16654 411 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 C11orf91Q3C1V1 193 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 SPDYAQ5MJ70 313 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 WASHC2DQ5SRD0 308 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 ZNF772Q68DY9 489 aaPredicted RBP17.77■□□□□ 0.43
SSH1-201ENST00000326470 CBWD2Q8IUF1 395 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 LARGE2Q8N3Y3 721 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 RIT2Q99578 217 aa17.77■□□□□ 0.43
SSH1-201ENST00000326470 ST6GALNAC4Q9H4F1 302 aa17.77■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms