RNA–Protein interactions for RNA: ENST00000323701.10

USP39-201, Transcript of ubiquitin specific peptidase 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP39, Length 2,177 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-201ENST00000323701 UPF3AQ9H1J1 476 aaKnown RBP19.8■□□□□ 0.76
USP39-201ENST00000323701 SIX4Q9UIU6 781 aa19.8■□□□□ 0.76
USP39-201ENST00000323701 MYCNP04198 464 aaPredicted RBP19.79■□□□□ 0.76
USP39-201ENST00000323701 H2AFZP0C0S5 128 aa19.79■□□□□ 0.76
USP39-201ENST00000323701 JADE1Q6IE81 842 aa19.79■□□□□ 0.76
USP39-201ENST00000323701 H2AFVQ71UI9 128 aa19.79■□□□□ 0.76
USP39-201ENST00000323701 RNF10Q8N5U6 811 aaKnown RBP19.79■□□□□ 0.76
USP39-201ENST00000323701 ZNF784Q8NCA9 323 aaPredicted RBP19.79■□□□□ 0.76
USP39-201ENST00000323701 GCOM2Q9BZD3 368 aaPredicted RBP19.79■□□□□ 0.76
USP39-201ENST00000323701 XYLT2Q9H1B5 865 aa19.79■□□□□ 0.76
USP39-201ENST00000323701 LUC7LQ9NQ29 371 aaKnown RBP19.79■□□□□ 0.76
USP39-201ENST00000323701 PUF60Q9UHX1 559 aaKnown RBP19.79■□□□□ 0.76
USP39-201ENST00000323701 HES2Q9Y543 173 aa19.79■□□□□ 0.76
USP39-201ENST00000323701 CASP8AP2Q9UKL3 1982 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 GRID2IPA4D2P6 1211 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 TADA3O75528 432 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 RARBP10826 455 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 GUCY2FP51841 1108 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 CATSPER4Q7RTX7 472 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 CXorf38Q8TB03 319 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 KATNAL1Q9BW62 490 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 THAP2Q9H0W7 228 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 CHORDC1Q9UHD1 332 aaPredicted RBP19.78■□□□□ 0.76
USP39-201ENST00000323701 CLSTN1O94985 981 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 FTCDO95954 541 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 CFHP08603 1231 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 EIF4BP23588 611 aaKnown RBP19.78■□□□□ 0.76
USP39-201ENST00000323701 SNX17Q15036 470 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 GDF6Q6KF10 455 aaPredicted RBP19.78■□□□□ 0.76
USP39-201ENST00000323701 FMNL3Q8IVF7 1028 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 C1orf127Q8N9H9 656 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 PSMB7Q99436 277 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 MTG1Q9BT17 334 aaPredicted RBP19.78■□□□□ 0.76
USP39-201ENST00000323701 TLR10Q9BXR5 811 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 OSGEPQ9NPF4 335 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 RNF19AQ9NV58 838 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 SRRDQ9UH36 339 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 PCDHGC5Q9Y5F6 944 aa19.78■□□□□ 0.76
USP39-201ENST00000323701 BTNL10A8MVZ5 291 aa19.77■□□□□ 0.76
USP39-201ENST00000323701 NPTXRO95502 500 aa19.77■□□□□ 0.76
USP39-201ENST00000323701 TMEM191BP0C7N4 346 aa19.77■□□□□ 0.76
USP39-201ENST00000323701 AP3M2P53677 418 aa19.77■□□□□ 0.76
USP39-201ENST00000323701 ELF2Q15723 593 aa19.77■□□□□ 0.76
USP39-201ENST00000323701 PTPROQ16827 1216 aa19.77■□□□□ 0.76
USP39-201ENST00000323701 ENOSF1Q7L5Y1 443 aa19.77■□□□□ 0.76
USP39-201ENST00000323701 MTERF4Q7Z6M4 381 aaKnown RBP19.77■□□□□ 0.76
USP39-201ENST00000323701 EPC1Q9H2F5 836 aa19.77■□□□□ 0.76
USP39-201ENST00000323701 XPNPEP3Q9NQH7 507 aa19.77■□□□□ 0.76
USP39-201ENST00000323701 PACSIN2Q9UNF0 486 aaPredicted RBP19.77■□□□□ 0.76
USP39-201ENST00000323701 JRKLQ9Y4A0 524 aa19.77■□□□□ 0.76
USP39-201ENST00000323701 TRIP11Q15643 1979 aa19.77■□□□□ 0.76
USP39-201ENST00000323701 FTLP02792 175 aaPredicted RBP19.77■□□□□ 0.75
USP39-201ENST00000323701 SSTR3P32745 418 aaPredicted RBP19.77■□□□□ 0.75
USP39-201ENST00000323701 MNS1Q8NEH6 495 aa19.77■□□□□ 0.75
USP39-201ENST00000323701 CFHR5Q9BXR6 569 aa19.77■□□□□ 0.75
USP39-201ENST00000323701 SAR1BQ9Y6B6 198 aa19.77■□□□□ 0.75
USP39-201ENST00000323701 GRIN2DO15399 1336 aa19.77■□□□□ 0.75
USP39-201ENST00000323701 ANO9A1A5B4 782 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 ASGR1P07306 291 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 CXCR5P32302 372 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 CDR2Q01850 454 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 SURF1Q15526 300 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 KCNA10Q16322 511 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 TMEM270Q6UE05 265 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 TXLNBQ8N3L3 684 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 UBR7Q8N806 425 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 COG1Q8WTW3 980 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 CAPZA3Q96KX2 299 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 ISCUQ9H1K1 167 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 GTF2IRD1Q9UHL9 959 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 IL18RAPO95256 599 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 PDE6CP51160 858 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 CCSAPQ6IQ19 270 aaPredicted RBP19.76■□□□□ 0.75
USP39-201ENST00000323701 LRRC57Q8N9N7 239 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 ALS2CR12Q96Q35 445 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 SNTG2Q9NY99 539 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 INTUQ9ULD6 942 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 POLIQ9UNA4 740 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 COG5Q9UP83 839 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 PCDHB4Q9Y5E5 795 aa19.76■□□□□ 0.75
USP39-201ENST00000323701 PDE2AO00408 941 aaPredicted RBP19.75■□□□□ 0.75
USP39-201ENST00000323701 KRT19P08727 400 aa19.75■□□□□ 0.75
USP39-201ENST00000323701 WEE2P0C1S8 567 aa19.75■□□□□ 0.75
USP39-201ENST00000323701 NOP2P46087 812 aaKnown RBP19.75■□□□□ 0.75
USP39-201ENST00000323701 NKX3-2P78367 333 aa19.75■□□□□ 0.75
USP39-201ENST00000323701 SCARA5Q6ZMJ2 495 aa19.75■□□□□ 0.75
USP39-201ENST00000323701 TPCN2Q8NHX9 752 aa19.75■□□□□ 0.75
USP39-201ENST00000323701 SLC35G2Q8TBE7 412 aa19.75■□□□□ 0.75
USP39-201ENST00000323701 ANKRD36BP1Q96IX9 119 aa19.75■□□□□ 0.75
USP39-201ENST00000323701 OSBPL7Q9BZF2 842 aa19.75■□□□□ 0.75
USP39-201ENST00000323701 NXF3Q9H4D5 531 aaKnown RBP19.75■□□□□ 0.75
USP39-201ENST00000323701 SNX12Q9UMY4 172 aa19.75■□□□□ 0.75
USP39-201ENST00000323701 MROH7Q68CQ1 1323 aa19.75■□□□□ 0.75
USP39-201ENST00000323701 ATMINO43313 823 aaPredicted RBP19.74■□□□□ 0.75
USP39-201ENST00000323701 TNNC2P02585 160 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 ITGB3P05106 788 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 TMEM253P0C7T8 217 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 CD58P19256 250 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 ASPAP45381 313 aa19.74■□□□□ 0.75
USP39-201ENST00000323701 TRPC3Q13507 836 aa19.74■□□□□ 0.75
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms