RNA–Protein interactions for RNA: ENST00000321728.11

PRKCB-202, Transcript of protein kinase C beta, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PRKCB, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-202ENST00000321728 SMC6Q96SB8 1091 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 VCXQ9H320 206 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 GRID1Q9ULK0 1009 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 USP20Q9Y2K6 914 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 DYNC1LI1Q9Y6G9 523 aaKnown RBP19■□□□□ 0.63
PRKCB-202ENST00000321728 ANKRD33BA6NCL7 494 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 K7ENM7 598 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 SP100P23497 879 aaPredicted RBP19■□□□□ 0.63
PRKCB-202ENST00000321728 PTPN4P29074 926 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 RPA3P35244 121 aaPredicted RBP19■□□□□ 0.63
PRKCB-202ENST00000321728 SGSM1Q2NKQ1 1148 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 HP1BP3Q5SSJ5 553 aaPredicted RBP19■□□□□ 0.63
PRKCB-202ENST00000321728 SYDE2Q5VT97 1194 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 C15orf52Q6ZUT6 534 aaKnown RBP19■□□□□ 0.63
PRKCB-202ENST00000321728 OTOP1Q7RTM1 612 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 PHLDB2Q86SQ0 1253 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 CCDC125Q86Z20 511 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 SLC9A9Q8IVB4 645 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 MFN1Q8IWA4 741 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 C10orf82Q8WW14 230 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 LBHD1Q9BQE6 289 aaPredicted RBP19■□□□□ 0.63
PRKCB-202ENST00000321728 ADAM33Q9BZ11 813 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 NMRK1Q9NWW6 199 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 EURLQ9NYK6 297 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 STOML1Q9UBI4 398 aa19■□□□□ 0.63
PRKCB-202ENST00000321728 LMNAP02545 664 aaKnown RBP18.99■□□□□ 0.63
PRKCB-202ENST00000321728 EEF2P13639 858 aaKnown RBP18.99■□□□□ 0.63
PRKCB-202ENST00000321728 CNGA1P29973 690 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 CDR2Q01850 454 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 ROR2Q01974 943 aaKnown RBP18.99■□□□□ 0.63
PRKCB-202ENST00000321728 PDK4Q16654 411 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 KHDC1Q4VXA5 237 aaKnown RBP18.99■□□□□ 0.63
PRKCB-202ENST00000321728 TRAPPC3LQ5T215 181 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 HHATQ5VTY9 493 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 CAPN12Q6ZSI9 719 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 GSTA5Q7RTV2 222 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 RIBC1Q8N443 379 aaPredicted RBP18.99■□□□□ 0.63
PRKCB-202ENST00000321728 CERS5Q8N5B7 392 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 CCDC89Q8N998 374 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 UCMAQ8WVF2 138 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 KREMEN1Q96MU8 473 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 CIITAP33076 1130 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 MXI1P50539 228 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 NR1H3Q13133 447 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 PKN2Q16513 984 aaKnown RBP18.99■□□□□ 0.63
PRKCB-202ENST00000321728 RNF220Q5VTB9 566 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 RFWD3Q6PCD5 774 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 MTDHQ86UE4 582 aaKnown RBP18.99■□□□□ 0.63
PRKCB-202ENST00000321728 APLFQ8IW19 511 aaPredicted RBP18.99■□□□□ 0.63
PRKCB-202ENST00000321728 BBOF1Q8ND07 529 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 DENND1AQ8TEH3 1009 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 KIAA1586Q9HCI6 787 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 NPHS2Q9NP85 383 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 SAYSD1Q9NPB0 183 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 UBN1Q9NPG3 1134 aa18.99■□□□□ 0.63
PRKCB-202ENST00000321728 CYP11B1P15538 503 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 NLRP9Q7RTR0 991 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 CFAP57Q96MR6 1250 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 CBWD1Q9BRT8 395 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 PPP1R12CQ9BZL4 782 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 SPATA31A6Q5VVP1 1343 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 HLA-DOAP06340 250 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 VHLP40337 213 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 RCN2Q14257 317 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 KCTD17Q8N5Z5 321 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 ZNF333Q96JL9 665 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 NACC1Q96RE7 527 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.98■□□□□ 0.63
PRKCB-202ENST00000321728 ASB3Q9Y575 518 aa18.98■□□□□ 0.63
PRKCB-202ENST00000321728 RALAP11233 206 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 P3H1Q32P28 736 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 DAB2IPQ5VWQ8 1189 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 C4orf50Q6ZRC1 276 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 ZSWIM2Q8NEG5 633 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 DCAF4Q8WV16 495 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 SMG5Q9UPR3 1016 aaKnown RBP18.97■□□□□ 0.63
PRKCB-202ENST00000321728 TRAFD1O14545 582 aaPredicted RBP18.97■□□□□ 0.63
PRKCB-202ENST00000321728 P4HA2O15460 535 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 PRPF4O43172 522 aaKnown RBP eCLIP18.97■□□□□ 0.63
PRKCB-202ENST00000321728 MFAP3P55082 362 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 UBXN2AP68543 259 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 RCN1Q15293 331 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 SLC1A5Q15758 541 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 FYB2Q5VWT5 728 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 RGS9BPQ6ZS82 235 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 OTOAQ7RTW8 1153 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 GALNT15Q8N3T1 639 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 SH3TC2Q8TF17 1288 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 TMEM117Q9H0C3 514 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 WRAP73Q9P2S5 460 aaPredicted RBP18.97■□□□□ 0.63
PRKCB-202ENST00000321728 SCOCQ9UIL1 159 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 DCTN4Q9UJW0 460 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 ARHGEF35A5YM69 484 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 BMP3P12645 472 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 MUTP22033 750 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 ATP2B4P23634 1241 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 GCAP28676 217 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 SLC45A4Q5BKX6 768 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 PPP1R15BQ5SWA1 713 aa18.97■□□□□ 0.63
PRKCB-202ENST00000321728 C1orf220Q5T0J3 134 aa18.97■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 540.6 ms