RNA–Protein interactions for RNA: ENST00000320755.11

COL9A1-201, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 1 (best) BASIC

Gene COL9A1, Length 3,059 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-201ENST00000320755 YTHDF3Q7Z739 585 aaKnown RBP18.57■□□□□ 0.56
COL9A1-201ENST00000320755 MICALL2Q8IY33 904 aa18.57■□□□□ 0.56
COL9A1-201ENST00000320755 SAMD3Q8N6K7 520 aa18.57■□□□□ 0.56
COL9A1-201ENST00000320755 DYDC1Q8WWB3 177 aa18.57■□□□□ 0.56
COL9A1-201ENST00000320755 FAM212AQ96EL1 285 aa18.57■□□□□ 0.56
COL9A1-201ENST00000320755 ELAC2Q9BQ52 826 aaKnown RBP18.57■□□□□ 0.56
COL9A1-201ENST00000320755 TARS2Q9BW92 718 aaKnown RBP18.57■□□□□ 0.56
COL9A1-201ENST00000320755 MYPNQ86TC9 1320 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 SRRM3A6NNA2 597 aaPredicted RBP18.56■□□□□ 0.56
COL9A1-201ENST00000320755 PAEPP09466 180 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 GBP1P32455 592 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 SP2Q02086 613 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 FSTL1Q12841 308 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 KAZNQ674X7 775 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 SEPT14Q6ZU15 432 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 HVCN1Q96D96 273 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 KCNK9Q9NPC2 374 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 PICK1Q9NRD5 415 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 ADAM22Q9P0K1 906 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 PI4K2BG5E9Z4 385 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 DSG3P32926 999 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 TMEM132BQ14DG7 1078 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 ANKRD42Q8N9B4 389 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 SCLT1Q96NL6 688 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 JPH2Q9BR39 696 aaPredicted RBP18.56■□□□□ 0.56
COL9A1-201ENST00000320755 AAASQ9NRG9 546 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 CNOT7Q9UIV1 285 aaKnown RBP18.56■□□□□ 0.56
COL9A1-201ENST00000320755 SBDSQ9Y3A5 250 aaKnown RBP eCLIP18.56■□□□□ 0.56
COL9A1-201ENST00000320755 UMODL1Q5DID0 1318 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 DOCK5Q9H7D0 1870 aa18.56■□□□□ 0.56
COL9A1-201ENST00000320755 K7ERI5 159 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 EXTL3O43909 919 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 AGTP01019 485 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 GARTP22102 1010 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 GTF2H1P32780 548 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 EMC2Q15006 297 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 ATP13A4Q4VNC1 1196 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 IPO4Q8TEX9 1081 aaKnown RBP18.55■□□□□ 0.56
COL9A1-201ENST00000320755 GGT7Q9UJ14 662 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 CD2APQ9Y5K6 639 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 IBSPP21815 317 aaPredicted RBP18.55■□□□□ 0.56
COL9A1-201ENST00000320755 GTF2A1P52655 376 aaPredicted RBP18.55■□□□□ 0.56
COL9A1-201ENST00000320755 TAS2R40P59535 323 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 ZNF394Q53GI3 561 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 ATXN2LQ8WWM7 1075 aaKnown RBP18.55■□□□□ 0.56
COL9A1-201ENST00000320755 HAPLN2Q9GZV7 340 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 C17orf75Q9HAS0 396 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 APOBEC3GQ9HC16 384 aaKnown RBP18.55■□□□□ 0.56
COL9A1-201ENST00000320755 A1CFQ9NQ94 594 aaKnown RBP18.55■□□□□ 0.56
COL9A1-201ENST00000320755 RBAKQ9NYW8 714 aaPredicted RBP18.55■□□□□ 0.56
COL9A1-201ENST00000320755 ANAPC5Q9UJX4 755 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 TP73O15350 636 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 GSTA5Q7RTV2 222 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 CNPY4Q8N129 248 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 ZNF280CQ8ND82 737 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 DEPTORQ8TB45 409 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 ASAP3Q8TDY4 903 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 ARHGAP28Q9P2N2 729 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 FBXO40Q9UH90 709 aa18.55■□□□□ 0.56
COL9A1-201ENST00000320755 ZNF541Q9H0D2 1346 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 THAP12O43422 761 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 ATF2P15336 505 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 GNA15P30679 374 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 ZACNQ401N2 412 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 HP1BP3Q5SSJ5 553 aaPredicted RBP18.54■□□□□ 0.56
COL9A1-201ENST00000320755 EXOC3L1Q86VI1 746 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 ARHGEF2Q92974 986 aaKnown RBP18.54■□□□□ 0.56
COL9A1-201ENST00000320755 MSTO1Q9BUK6 570 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 ATXN2Q99700 1313 aaKnown RBP18.54■□□□□ 0.56
COL9A1-201ENST00000320755 VNN1O95497 513 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 GAS8O95995 478 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 GMPSP49915 693 aaPredicted RBP18.54■□□□□ 0.56
COL9A1-201ENST00000320755 ENOSF1Q7L5Y1 443 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 CCDC197Q8NCU1 140 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 RDM1Q8NG50 284 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 OR5B17Q8NGF7 314 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 SNF8Q96H20 258 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 RUNDC3BQ96NL0 473 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 ZNF317Q96PQ6 595 aaPredicted RBP18.54■□□□□ 0.56
COL9A1-201ENST00000320755 CAMKK2Q96RR4 588 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 DCLK3Q9C098 648 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 PDLIM7Q9NR12 457 aa18.54■□□□□ 0.56
COL9A1-201ENST00000320755 ZNF214Q9UL59 606 aaPredicted RBP18.54■□□□□ 0.56
COL9A1-201ENST00000320755 ZNFX1Q9P2E3 1918 aaKnown RBP18.54■□□□□ 0.56
COL9A1-201ENST00000320755 MIS18BP1Q6P0N0 1132 aa18.53■□□□□ 0.56
COL9A1-201ENST00000320755 ABHD15Q6UXT9 468 aa18.53■□□□□ 0.56
COL9A1-201ENST00000320755 ACSF2Q96CM8 615 aaPredicted RBP18.53■□□□□ 0.56
COL9A1-201ENST00000320755 DDX27Q96GQ7 796 aaKnown RBP18.53■□□□□ 0.56
COL9A1-201ENST00000320755 C9orf72Q96LT7 481 aa18.53■□□□□ 0.56
COL9A1-201ENST00000320755 TCHPQ9BT92 498 aa18.53■□□□□ 0.56
COL9A1-201ENST00000320755 CYP39A1Q9NYL5 469 aa18.53■□□□□ 0.56
COL9A1-201ENST00000320755 GSTTP1A0A1W2PQM5 241 aa18.53■□□□□ 0.56
COL9A1-201ENST00000320755 C5orf60A6NFR6 353 aa18.53■□□□□ 0.56
COL9A1-201ENST00000320755 HGSO14964 777 aaPredicted RBP18.53■□□□□ 0.56
COL9A1-201ENST00000320755 DKC1O60832 514 aaKnown RBP eCLIP18.53■□□□□ 0.56
COL9A1-201ENST00000320755 C4BPAP04003 597 aaKnown RBP18.53■□□□□ 0.56
COL9A1-201ENST00000320755 KRT10P13645 584 aa18.53■□□□□ 0.56
COL9A1-201ENST00000320755 CNTN2Q02246 1040 aa18.53■□□□□ 0.56
COL9A1-201ENST00000320755 ANKRD20A8PQ5CZ79 823 aa18.53■□□□□ 0.56
COL9A1-201ENST00000320755 ZNF365Q70YC5 407 aa18.53■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms