RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 EXOC7Q9UPT5 735 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 COMTP21964 271 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 LIG4P49917 911 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 NCKAP1LP55160 1127 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 WNT7BP56706 349 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 ZBTB41Q5SVQ8 909 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 SLFN11Q7Z7L1 901 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 FMO2Q99518 471 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 SPATS2LQ9NUQ6 558 aaKnown RBP16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 STK38LQ9Y2H1 464 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 DOCK5Q9H7D0 1870 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 AP1G2O75843 785 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 PSAPP07602 524 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 CHRNB2P17787 502 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 GJC1P36383 396 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 TREML2Q5T2D2 321 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 SCARA3Q6AZY7 606 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 SLC16A10Q8TF71 515 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 C18orf8Q96DM3 657 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 CYP26B1Q9NR63 512 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 INTS9Q9NV88 658 aaKnown RBP16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 SAMD15Q9P1V8 674 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 PNMA3Q9UL41 463 aa16.59■□□□□ 0.25
SHROOM1-201ENST00000319854 TCRBV7S2A1N4TA0A589 114 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 LINGO3P0C6S8 592 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 SLCO1A2P46721 670 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 CCDC38Q502W7 563 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 KCNV2Q8TDN2 545 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 CPA5Q8WXQ8 436 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 IFT74Q96LB3 600 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 NT5C1BQ96P26 610 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 NUP85Q9BW27 656 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 ACAD9Q9H845 621 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 RAB20Q9NX57 234 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 SNX24Q9Y343 169 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 UTP11Q9Y3A2 253 aaKnown RBP16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 CFAP73A6NFT4 308 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 HGSO14964 777 aaPredicted RBP16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 DDX3YO15523 660 aaKnown RBP16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 GPC5P78333 572 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 NCAPG2Q86XI2 1143 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 MAP4K3Q8IVH8 894 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 FBXL13Q8NEE6 735 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 ANKEF1Q9NU02 776 aa16.58■□□□□ 0.24
SHROOM1-201ENST00000319854 RBBP6Q7Z6E9 1792 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 MYBL1P10243 752 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 CYP11B1P15538 503 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 KCNJ1P48048 391 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 HIRAP54198 1017 aaPredicted RBP16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 MFAP3P55082 362 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 PPATQ06203 517 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 ALCAMQ13740 583 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 SLC29A2Q14542 456 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 RASGEF1CQ8N431 466 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 FNBP1Q96RU3 617 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 ZDHHC18Q9NUE0 388 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 A0A0A6YYK5 440 aaPredicted RBP16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 SPDYE16A6NNV3 312 aaPredicted RBP16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 CCDC188H7C350 402 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 LYPLA2O95372 231 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 MAPTP10636 758 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 RPS12P25398 132 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 PLTPP55058 493 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 NLRP11P59045 1033 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 LRRC14Q15048 493 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 CCDC26Q8TAB7 109 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 IWS1Q96ST2 819 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 VPS33BQ9H267 617 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 SNX3O60493 162 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 CALRP27797 417 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 SSR1P43307 286 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 PDE6CP51160 858 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 FMO1Q01740 532 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 SNX1Q13596 522 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 GADL1Q6ZQY3 521 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 MOB2Q70IA6 237 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 CCHCR1Q8TD31 782 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 KLRG1Q96E93 195 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 FAM118BQ9BPY3 351 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 TCHPQ9BT92 498 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 TARS2Q9BW92 718 aaKnown RBP16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 SLITRK6Q9H5Y7 841 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 FAM114A2Q9NRY5 505 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 INTUQ9ULD6 942 aa16.57■□□□□ 0.24
SHROOM1-201ENST00000319854 TAS1R3Q7RTX0 852 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 ZBTB33Q86T24 672 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 CDR2LQ86X02 465 aaPredicted RBP16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 REPS2Q8NFH8 660 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 EPS8L3Q8TE67 593 aaKnown RBP16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 KIFAP3Q92845 792 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 KLHL33A6NCF5 533 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 EIF3BP55884 814 aaKnown RBP16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 DR1Q01658 176 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 CYP24A1Q07973 514 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 EMC2Q15006 297 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 GNPTABQ3T906 1256 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 GALNTL6Q49A17 601 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 ANKRD20A2Q5SQ80 823 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 ANKRD20A1Q5TYW2 823 aa16.56■□□□□ 0.24
SHROOM1-201ENST00000319854 ANKRD20A3Q5VUR7 823 aa16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms