RNA–Protein interactions for RNA: ENST00000309828.4

EIF3F-201, Transcript of eukaryotic translation initiation factor 3 subunit F, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EIF3F, Length 1,254 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EIF3F-201ENST00000309828 CHRNA1P02708 482 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 ATICP31939 592 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 THPOP40225 353 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 ARHGAP25P42331 645 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 MAGEA1P43355 309 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 NOP14P78316 857 aaKnown RBP15.18■□□□□ 0.02
EIF3F-201ENST00000309828 KIF5AQ12840 1032 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 CUL2Q13617 745 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 TMEM132DQ14C87 1099 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 TRIM71Q2Q1W2 868 aaKnown RBP15.18■□□□□ 0.02
EIF3F-201ENST00000309828 JADE1Q6IE81 842 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 USP38Q8NB14 1042 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 SH3TC2Q8TF17 1288 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 WNT8BQ93098 351 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 SNX27Q96L92 541 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 PI4K2AQ9BTU6 479 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.18■□□□□ 0.02
EIF3F-201ENST00000309828 STARD7Q9NQZ5 370 aa15.18■□□□□ 0.02
EIF3F-201ENST00000309828 TRIP12Q14669 1992 aaPredicted RBP15.18■□□□□ 0.02
EIF3F-201ENST00000309828 ANK1P16157 1881 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 RALGAPA2Q2PPJ7 1873 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 A0A087X0T9 212 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 MEFVO15553 781 aaPredicted RBP15.17■□□□□ 0.02
EIF3F-201ENST00000309828 NFICP08651 508 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 FAM228BP0C875 321 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 LBX1P52954 281 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 BPIFB4P59827 614 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 GFPT1Q06210 699 aaPredicted RBP15.17■□□□□ 0.02
EIF3F-201ENST00000309828 NAB2Q15742 525 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 UBXN11Q5T124 520 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 FAM43BQ6ZT52 329 aaPredicted RBP15.17■□□□□ 0.02
EIF3F-201ENST00000309828 HACE1Q8IYU2 909 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 KIF18AQ8NI77 898 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 KAT5Q92993 513 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 SYT11Q9BT88 431 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 EIF2AQ9BY44 585 aaKnown RBP15.17■□□□□ 0.02
EIF3F-201ENST00000309828 UNC93B1Q9H1C4 597 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 VRTNQ9H8Y1 702 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 APOBEC3GQ9HC16 384 aaKnown RBP15.17■□□□□ 0.02
EIF3F-201ENST00000309828 LZTFL1Q9NQ48 299 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 SNTG2Q9NY99 539 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 ADAMTS1Q9UHI8 967 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 ITGA11Q9UKX5 1188 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 NENFQ9UMX5 172 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 ST3GAL5Q9UNP4 418 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 PAXBP1Q9Y5B6 917 aa15.17■□□□□ 0.02
EIF3F-201ENST00000309828 GTF3C5Q9Y5Q8 519 aaPredicted RBP15.17■□□□□ 0.02
EIF3F-201ENST00000309828 ARVCFO00192 962 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 XPOTO43592 962 aaKnown RBP15.16■□□□□ 0.02
EIF3F-201ENST00000309828 STAU1O95793 577 aaKnown RBP15.16■□□□□ 0.02
EIF3F-201ENST00000309828 CST3P01034 146 aaPredicted RBP15.16■□□□□ 0.02
EIF3F-201ENST00000309828 PNMA6AP0CW24 399 aaPredicted RBP15.16■□□□□ 0.02
EIF3F-201ENST00000309828 TNFAIP3P21580 790 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 MYL6P60660 151 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 YWHAEP62258 255 aaKnown RBP15.16■□□□□ 0.02
EIF3F-201ENST00000309828 CYP27A1Q02318 531 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 ZNF699Q32M78 642 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 XKR4Q5GH76 650 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 CCDC122Q5T0U0 273 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 ALKAL1Q6UXT8 129 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 ZNF677Q86XU0 584 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 SLC30A5Q8TAD4 765 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 FAM84AQ96KN4 292 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 AGPAT1Q99943 283 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 NIF3L1Q9GZT8 377 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 FAM124BQ9H5Z6 455 aaPredicted RBP15.16■□□□□ 0.02
EIF3F-201ENST00000309828 ERVK-5Q9HDB9 667 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 TRMT13Q9NUP7 481 aaKnown RBP15.16■□□□□ 0.02
EIF3F-201ENST00000309828 CNTN3Q9P232 1028 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 NAGPAQ9UK23 515 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 OGDHLQ9ULD0 1010 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 INTUQ9ULD6 942 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 CNTN6Q9UQ52 1028 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 R3HCC1Q9Y3T6 440 aaKnown RBP15.16■□□□□ 0.02
EIF3F-201ENST00000309828 NUB1Q9Y5A7 615 aa15.16■□□□□ 0.02
EIF3F-201ENST00000309828 RECQL4O94761 1208 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 CTSHP09668 335 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 CCL5P13501 91 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 ACO1P21399 889 aaKnown RBP15.15■□□□□ 0.02
EIF3F-201ENST00000309828 USP8P40818 1118 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 GNG11P61952 73 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 RBP5P82980 135 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 FBXO47Q5MNV8 452 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 TWF2Q6IBS0 349 aaKnown RBP15.15■□□□□ 0.02
EIF3F-201ENST00000309828 GPIHBP1Q8IV16 184 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 C1orf127Q8N9H9 656 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 KIF12Q96FN5 646 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 TRAIPQ9BWF2 469 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 XYLT2Q9H1B5 865 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 NXF3Q9H4D5 531 aaKnown RBP15.15■□□□□ 0.02
EIF3F-201ENST00000309828 DPP3Q9NY33 737 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 IPPQ9Y573 584 aa15.15■□□□□ 0.02
EIF3F-201ENST00000309828 BTNL10A8MVZ5 291 aa15.14■□□□□ 0.01
EIF3F-201ENST00000309828 DDX3XO00571 662 aaKnown RBP eCLIP15.14■□□□□ 0.01
EIF3F-201ENST00000309828 CYP26A1O43174 497 aa15.14■□□□□ 0.01
EIF3F-201ENST00000309828 HSPA8P11142 646 aaKnown RBP15.14■□□□□ 0.01
EIF3F-201ENST00000309828 KRT5P13647 590 aa15.14■□□□□ 0.01
EIF3F-201ENST00000309828 P4HA1P13674 534 aa15.14■□□□□ 0.01
EIF3F-201ENST00000309828 KCNE1P15382 129 aa15.14■□□□□ 0.01
EIF3F-201ENST00000309828 CYP11B1P15538 503 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms