RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 BAIAP2L1Q9UHR4 511 aa4.23□□□□□ -1.73
USH2A-201ENST00000307340 AAR2Q9Y312 384 aaKnown RBP4.23□□□□□ -1.73
USH2A-201ENST00000307340 GUCY2CP25092 1073 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 HNRNPH2P55795 449 aaKnown RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 GUCY2DQ02846 1103 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 DCAF4L1Q3SXM0 396 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 ARCQ7LC44 396 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 LRRC6Q86X45 466 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 FKBP10Q96AY3 582 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 BDH2Q9BUT1 245 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 LRRC10BA6NIK2 292 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 MOCS3O95396 460 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 BAG6P46379 1132 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 QARSP47897 775 aaKnown RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 ACADVLP49748 655 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 NEK2P51955 445 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 NR1I3Q14994 352 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PDK1Q15118 436 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 CCNG2Q16589 344 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 BHLHB9Q6PI77 547 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 CLMNQ96JQ2 1002 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 BTBD7Q9P203 1132 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 KDM3BQ7LBC6 1761 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 ASB14A6NK59 587 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 ENTPD3O75355 529 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PEX14O75381 377 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 ANXA9O76027 345 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 RPA1P27694 616 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 TTLL9Q3SXZ7 439 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 TBC1D1Q86TI0 1168 aaPredicted RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 SPATA18Q8TC71 538 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 OSBPL1AQ9BXW6 950 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 LRRC4Q9HBW1 653 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 DNAJB4Q9UDY4 337 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 LRCH1Q9Y2L9 728 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 RRP15Q9Y3B9 282 aaKnown RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 CAPN7Q9Y6W3 813 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 RHOXF2BP0C7M4 288 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PHKA1P46020 1223 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 CLCN6P51797 869 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 RPL26P61254 145 aaKnown RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 FAM83EQ2M2I3 478 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 CCDC80Q76M96 950 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 SPATA4Q8NEY3 305 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 GPT2Q8TD30 523 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 RHOXF2Q9BQY4 288 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 SHOC2Q9UQ13 582 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 EVPLLA8MZ36 301 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PPP1R37O75864 691 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 MARK3P27448 753 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 TGFBR2P37173 567 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 TP53BP2Q13625 1128 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 RCN2Q14257 317 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 KMT5AQ9NQR1 393 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 AKAP7Q9P0M2 348 aaPredicted RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 KIAA1024Q9UPX6 916 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 TRIP11Q15643 1979 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 CCDC88CQ9P219 2028 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 ANGPT2O15123 496 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 CYP21A2P08686 494 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PPP4CP60510 307 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 GCNT1Q02742 428 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PTPRNQ16849 979 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 LPCAT2Q7L5N7 544 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 MMGT1Q8N4V1 131 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 RDH11Q8TC12 318 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PI4K2BQ8TCG2 481 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 DNAJB5O75953 348 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 MEA1Q16626 185 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 USP15Q9Y4E8 981 aaPredicted RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 GNPATO15228 680 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PHF2O75151 1096 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 WEE2P0C1S8 567 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 ABCB4P21439 1286 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 CREMQ03060 361 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 KRT73Q86Y46 540 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 KLF6Q99612 283 aaPredicted RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 CYP3A43Q9HB55 503 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 HDAC6Q9UBN7 1215 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 RGPD8O14715 1765 aaPredicted RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 TBC1D4O60343 1298 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 FBXO21O94952 628 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 HMBSP08397 361 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PSMC5P62195 406 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 ZNF556Q9HAH1 456 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 OLA1Q9NTK5 396 aaKnown RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 L3MBTL1Q9Y468 752 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 MAST2Q6P0Q8 1798 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 DDX60Q8IY21 1712 aaKnown RBP4.22□□□□□ -1.73
USH2A-201ENST00000307340 IRGMA1A4Y4 181 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 H0YJX3 145 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 MT-ND3P03897 115 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 SRGNP10124 158 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 RTP1P59025 263 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 SLC30A9Q6PML9 568 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 GMCL1P1Q8NEA9 526 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 VPS50Q96JG6 964 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 TINF2Q9BSI4 451 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 GOLPH3Q9H4A6 298 aa4.22□□□□□ -1.73
USH2A-201ENST00000307340 PRMT7Q9NVM4 692 aaPredicted RBP4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms