RNA–Protein interactions for RNA: ENST00000307142.8

SYNPO2-201, Transcript of synaptopodin 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SYNPO2, Length 7,295 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNPO2-201ENST00000307142 TRIM9Q9C026 710 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 DDX4Q9NQI0 724 aaKnown RBP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 ABHD10Q9NUJ1 306 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 PRPF4O43172 522 aaKnown RBP eCLIP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 MFAP3LO75121 409 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 HLA-DRAP01903 254 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 CKBP12277 381 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 IL1RL1Q01638 556 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 CCDC15Q0P6D6 951 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 FOXD4Q12950 439 aaPredicted RBP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 IMPG1Q17R60 797 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 FBXO32Q969P5 355 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 AGPAT1Q99943 283 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 POLR3CQ9BUI4 534 aaPredicted RBP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 TTC7AQ9ULT0 858 aaPredicted RBP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 IPPQ9Y573 584 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 CSDE1O75534 798 aaKnown RBP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 EGFRP00533 1210 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 ACADMP11310 421 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 AKT1P31749 480 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 FXR2P51116 673 aaKnown RBP eCLIP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 FAM71BQ8TC56 605 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 RMDN2Q96LZ7 410 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 KANSL3Q9P2N6 904 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 BCAP29Q9UHQ4 241 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 CKMP06732 381 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 ZC3H18Q86VM9 953 aaKnown RBP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 CEP120Q8N960 986 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 RBBP8NLQ8NC74 664 aaPredicted RBP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 KLHL11Q9NVR0 708 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 A0A087WZ62 844 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 GLTPD2A6NH11 291 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 FAM47DPA6NHR8 397 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 GSTA4O15217 222 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 EIF3DO15371 548 aaKnown RBP eCLIP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 WEE1P30291 646 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 IRX4P78413 519 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 SLC7A5Q01650 507 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 DGKZQ13574 1117 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 TTC8Q8TAM2 541 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 FDXACB1Q9BRP7 624 aaPredicted RBP11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 KLHL14Q9P2G3 628 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 APEX2Q9UBZ4 518 aa11.31□□□□□ -0.6
SYNPO2-201ENST00000307142 A6NNZ2 444 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 INSRRP14616 1297 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 CNTN2Q02246 1040 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 TUBB8Q3ZCM7 444 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 PID1Q7Z2X4 250 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 USP33Q8TEY7 942 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 TMEM60Q9H2L4 133 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 DIS3Q9Y2L1 958 aaKnown RBP11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 TTI1O43156 1089 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 TGFB3P10600 412 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 FMO5P49326 533 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 NOP14P78316 857 aaKnown RBP11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 LAMTOR4Q0VGL1 99 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 IQSEC1Q6DN90 963 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 CDKL3Q8IVW4 592 aaPredicted RBP11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 SAYSD1Q9NPB0 183 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 CFAP69A5D8W1 941 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 EEF2KO00418 725 aaKnown RBP11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 RTN2O75298 545 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 HOXA10P31260 410 aaPredicted RBP11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 SREBF1P36956 1147 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 IL9RQ01113 521 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 CHSY1Q86X52 802 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 RNF135Q8IUD6 432 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 ASAP3Q8TDY4 903 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 ZC3H15Q8WU90 426 aaKnown RBP11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 LRGUKQ96M69 825 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 MCEEQ96PE7 176 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 CATSPERBQ9H7T0 1116 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 GOLGA8KD6RF30 607 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 TM4SF1P30408 202 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 WNK4Q96J92 1243 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 TMEM8AQ9HCN3 771 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 DSEQ9UL01 958 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 IQANK1A0A1B0GTG1 560 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 PDGFRAP16234 1089 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 ETFBP38117 255 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 ETF1P62495 437 aaKnown RBP11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 MPZL3Q6UWV2 235 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 RHOT1Q8IXI2 618 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 TRIM54Q9BYV2 358 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 WDR91A4D1P6 747 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 AP1G2O75843 785 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 SCP2P22307 547 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 FGFR4P22455 802 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 FKBP1BP68106 108 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 BRD3Q15059 726 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 RBBP7Q16576 425 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 GPR142Q7Z601 462 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 ADGRF2Q8IZF7 708 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 CABS1Q96KC9 395 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 DRC3Q9H069 523 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 CYP4F11Q9HBI6 524 aa11.3□□□□□ -0.6
SYNPO2-201ENST00000307142 SLCO1A2P46721 670 aa11.29□□□□□ -0.6
SYNPO2-201ENST00000307142 SLC11A2P49281 568 aa11.29□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms