RNA–Protein interactions for RNA: ENST00000303406.4

HOXC4-201, Transcript of homeobox C4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXC4, Length 1,524 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4-201ENST00000303406 PTPN18Q99952 460 aa20.8■□□□□ 0.92
HOXC4-201ENST00000303406 INO80BQ9C086 356 aaPredicted RBP20.8■□□□□ 0.92
HOXC4-201ENST00000303406 ACP6Q9NPH0 428 aa20.8■□□□□ 0.92
HOXC4-201ENST00000303406 BHMG1C9JSJ3 638 aaPredicted RBP20.79■□□□□ 0.92
HOXC4-201ENST00000303406 TULP1O00294 542 aaPredicted RBP20.79■□□□□ 0.92
HOXC4-201ENST00000303406 HOXC6P09630 235 aa20.79■□□□□ 0.92
HOXC4-201ENST00000303406 MCF2P10911 925 aa20.79■□□□□ 0.92
HOXC4-201ENST00000303406 AARSP49588 968 aaKnown RBP eCLIP20.79■□□□□ 0.92
HOXC4-201ENST00000303406 SGSM1Q2NKQ1 1148 aa20.79■□□□□ 0.92
HOXC4-201ENST00000303406 SPOPLQ6IQ16 392 aa20.79■□□□□ 0.92
HOXC4-201ENST00000303406 CAVIN3Q969G5 261 aa20.79■□□□□ 0.92
HOXC4-201ENST00000303406 VCPIP1Q96JH7 1222 aa20.79■□□□□ 0.92
HOXC4-201ENST00000303406 NUP85Q9BW27 656 aa20.79■□□□□ 0.92
HOXC4-201ENST00000303406 IFT122Q9HBG6 1241 aa20.79■□□□□ 0.92
HOXC4-201ENST00000303406 NUB1Q9Y5A7 615 aa20.79■□□□□ 0.92
HOXC4-201ENST00000303406 PCDHB4Q9Y5E5 795 aa20.79■□□□□ 0.92
HOXC4-201ENST00000303406 A0A0U1RQG5 324 aaPredicted RBP20.78■□□□□ 0.92
HOXC4-201ENST00000303406 HEXIM1O94992 359 aaKnown RBP20.78■□□□□ 0.92
HOXC4-201ENST00000303406 MYBL2P10244 700 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 MKRN3Q13064 507 aaKnown RBP20.78■□□□□ 0.92
HOXC4-201ENST00000303406 ACVR2BQ13705 512 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 MCOLN2Q8IZK6 566 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 CD101Q93033 1021 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 ZSWIM1Q9BR11 485 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 CDT1Q9H211 546 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 CNOT8Q9UFF9 292 aaKnown RBP20.78■□□□□ 0.92
HOXC4-201ENST00000303406 CCDC66A2RUB6 948 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 KRIT1O00522 736 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 ZEB2O60315 1214 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 ZMYND10O75800 440 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 TNNC2P02585 160 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 MMP3P08254 477 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 SMPD1P17405 629 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 PAK2Q13177 524 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 AMHR2Q16671 573 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 GJC2Q5T442 439 aaPredicted RBP20.78■□□□□ 0.92
HOXC4-201ENST00000303406 MTHFD1LQ6UB35 978 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 RBBP8NLQ8NC74 664 aaPredicted RBP20.78■□□□□ 0.92
HOXC4-201ENST00000303406 ANKRD36BP1Q96IX9 119 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 FAM84AQ96KN4 292 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 NIF3L1Q9GZT8 377 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 MED4Q9NPJ6 270 aa20.78■□□□□ 0.92
HOXC4-201ENST00000303406 ANK1P16157 1881 aa20.77■□□□□ 0.92
HOXC4-201ENST00000303406 H3BRB1 525 aa20.77■□□□□ 0.92
HOXC4-201ENST00000303406 OAS2P29728 719 aaKnown RBP20.77■□□□□ 0.92
HOXC4-201ENST00000303406 GNA15P30679 374 aa20.77■□□□□ 0.92
HOXC4-201ENST00000303406 YWHAEP62258 255 aaKnown RBP20.77■□□□□ 0.92
HOXC4-201ENST00000303406 SLC7A5Q01650 507 aa20.77■□□□□ 0.92
HOXC4-201ENST00000303406 SEZ6Q53EL9 994 aa20.77■□□□□ 0.92
HOXC4-201ENST00000303406 DCAF12L1Q5VU92 463 aa20.77■□□□□ 0.92
HOXC4-201ENST00000303406 EEF1DP3Q658K8 133 aa20.77■□□□□ 0.92
HOXC4-201ENST00000303406 PHF13Q86YI8 300 aaPredicted RBP20.77■□□□□ 0.92
HOXC4-201ENST00000303406 OR6J1Q8NGC5 347 aa20.77■□□□□ 0.92
HOXC4-201ENST00000303406 CCDC26Q8TAB7 109 aa20.77■□□□□ 0.92
HOXC4-201ENST00000303406 RNPC3Q96LT9 517 aaKnown RBP20.77■□□□□ 0.92
HOXC4-201ENST00000303406 MTMR12Q9C0I1 747 aa20.77■□□□□ 0.92
HOXC4-201ENST00000303406 TUT1Q9H6E5 874 aaKnown RBP20.77■□□□□ 0.92
HOXC4-201ENST00000303406 RPF1Q9H9Y2 349 aaKnown RBP20.77■□□□□ 0.92
HOXC4-201ENST00000303406 RRAGCQ9HB90 399 aa20.77■□□□□ 0.92
HOXC4-201ENST00000303406 HPCAL4Q9UM19 191 aa20.77■□□□□ 0.92
HOXC4-201ENST00000303406 C11orf97A0A1B0GVM6 126 aaPredicted RBP20.76■□□□□ 0.91
HOXC4-201ENST00000303406 RRN3P2A6NIE6 340 aa20.76■□□□□ 0.91
HOXC4-201ENST00000303406 RAD51CO43502 376 aa20.76■□□□□ 0.91
HOXC4-201ENST00000303406 GLI1P08151 1106 aa20.76■□□□□ 0.91
HOXC4-201ENST00000303406 TMEM191BP0C7N4 346 aa20.76■□□□□ 0.91
HOXC4-201ENST00000303406 COMTP21964 271 aa20.76■□□□□ 0.91
HOXC4-201ENST00000303406 CTNNA1P35221 906 aaKnown RBP20.76■□□□□ 0.91
HOXC4-201ENST00000303406 TNNT3P45378 269 aaPredicted RBP20.76■□□□□ 0.91
HOXC4-201ENST00000303406 NSFP46459 744 aaKnown RBP20.76■□□□□ 0.91
HOXC4-201ENST00000303406 PEX5P50542 639 aa20.76■□□□□ 0.91
HOXC4-201ENST00000303406 TRPC3Q13507 836 aa20.76■□□□□ 0.91
HOXC4-201ENST00000303406 DGKDQ16760 1214 aa20.76■□□□□ 0.91
HOXC4-201ENST00000303406 MORN1Q5T089 497 aa20.76■□□□□ 0.91
HOXC4-201ENST00000303406 TMEM270Q6UE05 265 aa20.76■□□□□ 0.91
HOXC4-201ENST00000303406 ZNF410Q86VK4 478 aa20.76■□□□□ 0.91
HOXC4-201ENST00000303406 MINDY3Q9H8M7 445 aa20.76■□□□□ 0.91
HOXC4-201ENST00000303406 SLTMQ9NWH9 1034 aaKnown RBP eCLIP20.76■□□□□ 0.91
HOXC4-201ENST00000303406 GOLGA6L10A0A0M3HER8 536 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 B4GALT5O43286 388 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 CST3P01034 146 aaPredicted RBP20.75■□□□□ 0.91
HOXC4-201ENST00000303406 GJB1P08034 283 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 SLC1A1P43005 524 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 RNASE9P60153 205 aaKnown RBP20.75■□□□□ 0.91
HOXC4-201ENST00000303406 NOMO3P69849 1222 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 IGBP1P78318 339 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 CDC42EP1Q00587 391 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 PPFIA1Q13136 1202 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 CUL1Q13616 776 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 MESDQ14696 234 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 TMEM132AQ24JP5 1023 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 LIN9Q5TKA1 542 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 MON1BQ7L1V2 547 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 MAATS1Q7Z4T9 603 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 NPLOC4Q8TAT6 608 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 ELMO3Q96BJ8 720 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 ASB7Q9H672 318 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 PCDHA3Q9Y5H8 950 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 EVPLQ92817 2033 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 TRPM7Q96QT4 1865 aa20.75■□□□□ 0.91
HOXC4-201ENST00000303406 A0A087WZ62 844 aa20.74■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms