RNA–Protein interactions for RNA: ENST00000299185.12

DEPDC4-201, Transcript of DEP domain containing 4, humanhuman

TSL 1 (best)

Gene DEPDC4, Length 768 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-201ENST00000299185 SKOR2Q2VWA4 1001 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 TMEM259Q4ZIN3 620 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 GLRA4Q5JXX5 417 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 C9orf50Q5SZB4 431 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 ANKRD40Q6AI12 368 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 TWF2Q6IBS0 349 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 FAM109BQ6ICB4 259 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 TTI2Q6NXR4 508 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 ARMCX5Q6P1M9 558 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 SASS6Q6UVJ0 657 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 LIN28BQ6ZN17 250 aaKnown RBP eCLIP7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 SLCO4C1Q6ZQN7 724 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 C16orf59Q7L2K0 433 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 SRGAP1Q7Z6B7 1085 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 RPAINQ86UA6 219 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 RTN4RL1Q86UN2 441 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 LUZP1Q86V48 1076 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 CBWD2Q8IUF1 395 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 ELOA2Q8IYF1 753 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 SMG8Q8ND04 991 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 P2RX5Q93086 422 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 CCDC34Q96HJ3 373 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 ACO2Q99798 780 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 ADAM2Q99965 735 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 MRPL4Q9BYD3 311 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 IFIH1Q9BYX4 1025 aaKnown RBP7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 FZD8Q9H461 694 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 TSPY26PQ9H489 355 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 CBX8Q9HC52 389 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 PRMT7Q9NVM4 692 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 KLK14Q9P0G3 267 aa7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 CXXC1Q9P0U4 656 aaPredicted RBP7.09□□□□□ -1.27
DEPDC4-201ENST00000299185 PTPRJQ12913 1337 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 ZBBXA8MT70 800 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 H0YGN5 161 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 K7ERI5 159 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 ACKR2O00590 384 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 FAM189A1O60320 539 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 CAND2O75155 1236 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 RECQL4O94761 1208 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 PIGRP01833 764 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 CXCL10P02778 98 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 CXCL8P10145 99 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 FGFR1P11362 822 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 BMP4P12644 408 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 PROZP22891 400 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 AKAP5P24588 427 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 CCNE1P24864 410 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 ITGB7P26010 798 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 ACOT2P49753 483 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 AFF1P51825 1210 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 FPGSQ05932 587 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 NOLC1Q14978 699 aaKnown RBP eCLIP7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 NCAPHQ15003 741 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 KNOP1Q1ED39 458 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 PAN2Q504Q3 1202 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 PLEKHG4Q58EX7 1191 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 CEP135Q66GS9 1140 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 MPZL3Q6UWV2 235 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 OTOP2Q7RTS6 562 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 SPRED2Q7Z698 418 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 DHX40Q8IX18 779 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 NME8Q8N427 588 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 GUF1Q8N442 669 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 TRIML1Q8N9V2 468 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 ZNF507Q8TCN5 953 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 POMGNT1Q8WZA1 660 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 RABGGTAQ92696 567 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 HVCN1Q96D96 273 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 BUD13Q9BRD0 619 aaKnown RBP eCLIP7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 FAM213AQ9BRX8 229 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 MSTO1Q9BUK6 570 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 HTATIP2Q9BUP3 242 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 GBP3Q9H0R5 595 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 RBSNQ9H1K0 784 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 ST6GALNAC4Q9H4F1 302 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 MMRN2Q9H8L6 949 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 UTP3Q9NQZ2 479 aaKnown RBP eCLIP7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 SAMSN1Q9NSI8 373 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 TYW1Q9NV66 732 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 ANO10Q9NW15 660 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 SNTG2Q9NY99 539 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 TAB2Q9NYJ8 693 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 HSPBP1Q9NZL4 362 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 PLAGL2Q9UPG8 496 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 TNFSF13BQ9Y275 285 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 INPP5FQ9Y2H2 1132 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 IPPQ9Y573 584 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 MKI67P46013 3256 aaKnown RBP7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 MICAL3Q7RTP6 2002 aa7.08□□□□□ -1.28
DEPDC4-201ENST00000299185 A0A1B0GTH6 734 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 GRXCR1A8MXD5 290 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 PSMA7O14818 248 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 N4BP3O15049 544 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 ASAP2O43150 1006 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 AKAP3O75969 853 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 NFICP08651 508 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 CCDC192P0DO97 292 aa7.07□□□□□ -1.28
DEPDC4-201ENST00000299185 ATP1A3P13637 1013 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms