RNA–Protein interactions for RNA: ENST00000298746.4

TRUB1-201, Transcript of TruB pseudouridine synthase family member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRUB1, Length 3,408 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRUB1-201ENST00000298746 STARD13Q9Y3M8 1113 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 PLCH1Q4KWH8 1693 aa12.1□□□□□ -0.47
TRUB1-201ENST00000298746 SGK1O00141 431 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 RPS6KA3P51812 740 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 AP3B2Q13367 1082 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 C11orf91Q3C1V1 193 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 PCNX4Q63HM2 1172 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 LLGL2Q6P1M3 1020 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 ARHGAP24Q8N264 748 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 B4GALNT2Q8NHY0 566 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 OLFML3Q9NRN5 406 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 GTF3C4Q9UKN8 822 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 PGM1P36871 562 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 ARSEP51690 589 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 YARSP54577 528 aaKnown RBP12.09□□□□□ -0.47
TRUB1-201ENST00000298746 CCNJLQ8IV13 435 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 ZC3H3Q8IXZ2 948 aaKnown RBP12.09□□□□□ -0.47
TRUB1-201ENST00000298746 EPS8L1Q8TE68 723 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 NACC1Q96RE7 527 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 UVRAGQ9P2Y5 699 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 KLHL33A6NCF5 533 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 ARHGAP42A6NI28 874 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 E7ENQ6 273 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 EIF3DO15371 548 aaKnown RBP eCLIP12.09□□□□□ -0.47
TRUB1-201ENST00000298746 GDF11O95390 407 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 FOSP01100 380 aaPredicted RBP12.09□□□□□ -0.47
TRUB1-201ENST00000298746 ZSCAN5DPP0CG00 497 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 DYNLT1P63172 113 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 NR1H3Q13133 447 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 PALM2Q8IXS6 379 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 XXYLT1Q8NBI6 393 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 RILPQ96NA2 401 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 C11orf70Q9BRQ4 267 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 ANKFY1Q9P2R3 1169 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 NENFQ9UMX5 172 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 STK24Q9Y6E0 443 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 ROBO3Q96MS0 1386 aa12.09□□□□□ -0.47
TRUB1-201ENST00000298746 A0A1W2PPM1 405 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 ZWINTO95229 277 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 KRT10P13645 584 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 ADRA1DP25100 572 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 CLK2P49760 499 aaKnown RBP12.08□□□□□ -0.48
TRUB1-201ENST00000298746 SLC1A5Q15758 541 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 PDCD2Q16342 344 aaPredicted RBP12.08□□□□□ -0.48
TRUB1-201ENST00000298746 NBPF20Q3BBV1 942 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 IRGCQ6NXR0 463 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 LRRC74BQ6ZQY2 392 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 OTOAQ7RTW8 1153 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 ZNF75CPQ92670 426 aaPredicted RBP12.08□□□□□ -0.48
TRUB1-201ENST00000298746 OSBPL8Q9BZF1 889 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 DCLK3Q9C098 648 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 KIAA1586Q9HCI6 787 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 ARMCX1Q9P291 453 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 SMG5Q9UPR3 1016 aaKnown RBP12.08□□□□□ -0.48
TRUB1-201ENST00000298746 DAGLAQ9Y4D2 1042 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 hCG_2014768A0A024R1R8 64 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 UBAP1LF5GYI3 381 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 EDF1O60869 148 aaKnown RBP12.08□□□□□ -0.48
TRUB1-201ENST00000298746 ACADSP16219 412 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 GNAZP19086 355 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 KDSRQ06136 332 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.08□□□□□ -0.48
TRUB1-201ENST00000298746 ETNPPLQ8TBG4 499 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 PYROXD1Q8WU10 500 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 BICD1Q96G01 975 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 PI4K2AQ9BTU6 479 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 GPR88Q9GZN0 384 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 KAT6AQ92794 2004 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 ZNF142P52746 1687 aaPredicted RBP12.08□□□□□ -0.48
TRUB1-201ENST00000298746 CYP11B1P15538 503 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 RFX1P22670 979 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 SERPINB3P29508 390 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 CCDC15Q0P6D6 951 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 ACVR2BQ13705 512 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 BBS9Q3SYG4 887 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 CERKLQ49MI3 558 aaPredicted RBP12.08□□□□□ -0.48
TRUB1-201ENST00000298746 CEP128Q6ZU80 1094 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 TRABD2AQ86V40 505 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 HIPK4Q8NE63 616 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 ZNF577Q9BSK1 485 aa12.08□□□□□ -0.48
TRUB1-201ENST00000298746 FBXO6Q9NRD1 293 aaPredicted RBP12.08□□□□□ -0.48
TRUB1-201ENST00000298746 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
TRUB1-201ENST00000298746 SNED1Q8TER0 1413 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 COL18A1P39060 1754 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 MEIS2O14770 477 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 ENO1P06733 434 aaKnown RBP12.07□□□□□ -0.48
TRUB1-201ENST00000298746 KITP10721 976 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 GZMAP12544 262 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 RHBDL3P58872 404 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 GPSM2P81274 684 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 PTK6Q13882 451 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 FASTKD3Q14CZ7 662 aaKnown RBP12.07□□□□□ -0.48
TRUB1-201ENST00000298746 BMT2Q1RMZ1 405 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 LIN9Q5TKA1 542 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 C4orf50Q6ZRC1 276 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 CTAGE3PQ8IX95 158 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 GALNT15Q8N3T1 639 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 NSL1Q96IY1 281 aa12.07□□□□□ -0.48
TRUB1-201ENST00000298746 PPARGC1AQ9UBK2 798 aaKnown RBP12.07□□□□□ -0.48
TRUB1-201ENST00000298746 ADGRA3Q8IWK6 1321 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms