RNA–Protein interactions for RNA: ENST00000297350.8

TNFRSF11B-201, Transcript of TNF receptor superfamily member 11b, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF11B, Length 2,402 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11B-201ENST00000297350 ADAT2Q7Z6V5 191 aaKnown RBP10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CPLX4Q7Z7G2 160 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PHF13Q86YI8 300 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 RHOT1Q8IXI2 618 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 KATNAL2Q8IYT4 538 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ZSWIM2Q8NEG5 633 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 DNERQ8NFT8 737 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ATG4CQ96DT6 458 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 TRAIPQ9BWF2 469 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 TMEM134Q9H6X4 195 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 XPNPEP1Q9NQW7 623 aa10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SEPT9Q9UHD8 586 aaPredicted RBP10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 DDX20Q9UHI6 824 aaKnown RBP10.68□□□□□ -0.7
TNFRSF11B-201ENST00000297350 DLATP10515 647 aaKnown RBP10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 DRD4P21917 467 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ACTR2P61160 394 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SNRNP48Q6IEG0 339 aaKnown RBP10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 RHBDF2Q6PJF5 856 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 MON1BQ7L1V2 547 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ATL2Q8NHH9 583 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SEC16BQ96JE7 1060 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CGRRF1Q99675 332 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PLCD4Q9BRC7 762 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 FAM213AQ9BRX8 229 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 KDM4CQ9H3R0 1056 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PAPPA2Q9BXP8 1791 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SBF1O95248 1867 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 TMEM150BA6NC51 233 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 H0YHG0 523 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ATMINO43313 823 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ATG7O95352 703 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 LSM8O95777 96 aaKnown RBP10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 HLA-DRAP01903 254 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 C4BPAP04003 597 aaKnown RBP10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 COPB2P35606 906 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PIK3CAP42336 1068 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 POLGP54098 1239 aaPredicted RBP10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 TAP1Q03518 808 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 KRT17Q04695 432 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 R3HDM1Q15032 1099 aaKnown RBP10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CCNG2Q16589 344 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 LRRC38Q5VT99 294 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SWSAP1Q6NVH7 229 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 APOBEC3FQ8IUX4 373 aaKnown RBP10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CCDC50Q8IVM0 306 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 EXOC8Q8IYI6 725 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ZDHHC14Q8IZN3 488 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CCDC89Q8N998 374 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 EXD1Q8NHP7 514 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 NIFKQ9BYG3 293 aaKnown RBP10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PORCNQ9H237 461 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PPCSQ9HAB8 311 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 AGO2Q9UKV8 859 aaKnown RBP10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PPP2R3BQ9Y5P8 575 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 MROH7Q68CQ1 1323 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ADGRA3Q8IWK6 1321 aa10.67□□□□□ -0.7
TNFRSF11B-201ENST00000297350 GSTA1P08263 222 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ATF2P15336 505 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CUL2Q13617 745 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SURF1Q15526 300 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SKIDA1Q1XH10 827 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 RNF187Q5TA31 235 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ABRAQ8N0Z2 381 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 RIBC1Q8N443 379 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PROCA1Q8NCQ7 364 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CCDC197Q8NCU1 140 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CHST13Q8NET6 341 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ATXN2LQ8WWM7 1075 aaKnown RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 DDX27Q96GQ7 796 aaKnown RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ZNF317Q96PQ6 595 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 KIFC3Q9BVG8 833 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 DCLK3Q9C098 648 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SEMA4AQ9H3S1 761 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 DHX33Q9H6R0 707 aaKnown RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 TOPORSQ9NS56 1045 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 INTS9Q9NV88 658 aaKnown RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 HOXC10Q9NYD6 342 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CYP39A1Q9NYL5 469 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ZNF214Q9UL59 606 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 MAFBQ9Y5Q3 323 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 CLDN3O15551 220 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 GAS2O43903 313 aaKnown RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 OATP04181 439 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 SHBGP04278 402 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ABHD2P08910 425 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PTPRAP18433 802 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 TMOD1P28289 359 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PTPN7P35236 360 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 COPS2P61201 443 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 MCL1Q07820 350 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 MKRN3Q13064 507 aaKnown RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 IFT88Q13099 833 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 NOL9Q5SY16 702 aaKnown RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ICE2Q659A1 982 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 PLEKHA7Q6IQ23 1121 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 AADACL2Q6P093 401 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 DRICH1Q6PGQ1 229 aaPredicted RBP10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 ZPBP2Q6X784 338 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 TAS1R3Q7RTX0 852 aa10.66□□□□□ -0.7
TNFRSF11B-201ENST00000297350 DEPTORQ8TB45 409 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms