RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 SF3A3Q12874 501 aaKnown RBP eCLIP12.59□□□□□ -0.39
RHO-201ENST00000296271 SCARA5Q6ZMJ2 495 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 CHST13Q8NET6 341 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 PPP1R13LQ8WUF5 828 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 RNF25Q96BH1 459 aaPredicted RBP12.59□□□□□ -0.39
RHO-201ENST00000296271 ACSF2Q96CM8 615 aaPredicted RBP12.59□□□□□ -0.39
RHO-201ENST00000296271 FMO2Q99518 471 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 MTMR12Q9C0I1 747 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 SEMA4AQ9H3S1 761 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 PNMA2Q9UL42 364 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 USTQ9Y2C2 406 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 RRP15Q9Y3B9 282 aaKnown RBP12.59□□□□□ -0.39
RHO-201ENST00000296271 STYXL1Q9Y6J8 313 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 ADGRA2Q96PE1 1338 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 FOXO6A8MYZ6 492 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 ZBTB42B2RXF5 422 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 MTA2O94776 668 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 FGFR4P22455 802 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 CTNNA2P26232 953 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 NAMPTP43490 491 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 VPS41P49754 854 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 TAS2R40P59535 323 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 CLDN10P78369 228 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 ORC1Q13415 861 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 CUL2Q13617 745 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 MMS22LQ6ZRQ5 1243 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 RIOX2Q8IUF8 465 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 FMNL3Q8IVF7 1028 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 C10orf67Q8IYJ2 551 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 CCDC105Q8IYK2 499 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 RNF149Q8NC42 400 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 DNERQ8NFT8 737 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 RPS6KC1Q96S38 1066 aa12.59□□□□□ -0.39
RHO-201ENST00000296271 NOVA2Q9UNW9 492 aaKnown RBP12.59□□□□□ -0.39
RHO-201ENST00000296271 OTOFQ9HC10 1997 aa12.58□□□□□ -0.39
RHO-201ENST00000296271 EVPLQ92817 2033 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 GOLGA6L10A0A0M3HER8 536 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 MIF4GDA9UHW6 222 aaKnown RBP12.58□□□□□ -0.4
RHO-201ENST00000296271 DKC1O60832 514 aaKnown RBP eCLIP12.58□□□□□ -0.4
RHO-201ENST00000296271 WEE2P0C1S8 567 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 GTF2H1P32780 548 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 PSMC4P43686 418 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 RPL7AP62424 266 aaKnown RBP12.58□□□□□ -0.4
RHO-201ENST00000296271 NOP14P78316 857 aaKnown RBP12.58□□□□□ -0.4
RHO-201ENST00000296271 IRX3P78415 501 aaPredicted RBP12.58□□□□□ -0.4
RHO-201ENST00000296271 ADCY2Q08462 1091 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 WDR44Q5JSH3 913 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 SEL1L2Q5TEA6 688 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 CD302Q8IX05 232 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 RBPJLQ9UBG7 517 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 CSADQ9Y600 493 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 FAM189A1O60320 539 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 PPFIA4O75335 1185 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 EDNRBP24530 442 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 GNA15P30679 374 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 COILP38432 576 aaPredicted RBP12.58□□□□□ -0.4
RHO-201ENST00000296271 MYL6P60660 151 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 NCOA4Q13772 614 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 TTLL12Q14166 644 aaPredicted RBP12.58□□□□□ -0.4
RHO-201ENST00000296271 TCEAL1Q15170 157 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 SRLQ86TD4 932 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 CCDC25Q86WR0 208 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 THNSL1Q8IYQ7 743 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 RBBP8NLQ8NC74 664 aaPredicted RBP12.58□□□□□ -0.4
RHO-201ENST00000296271 MDM1Q8TC05 714 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 NIFKQ9BYG3 293 aaKnown RBP12.58□□□□□ -0.4
RHO-201ENST00000296271 TXLNGYQ9BZA5 131 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 WNT8AQ9H1J5 351 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 MINDY3Q9H8M7 445 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 FAM114A2Q9NRY5 505 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 MGAMO43451 1857 aa12.58□□□□□ -0.4
RHO-201ENST00000296271 TLDC2A0PJX2 215 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 PI4K2BG5E9Z4 385 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 TP73O15350 636 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 THAP12O43422 761 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 ADCY3O60266 1144 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 MSCO60682 206 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 CAND2O75155 1236 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 STAM2O75886 525 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 MYZAPP0CAP1 466 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 SLCO1A2P46721 670 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 CLCN3P51790 818 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 RWDD2BP57060 319 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 IGBP1P78318 339 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 SKOR1P84550 965 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 KRT71Q3SY84 523 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 MON1BQ7L1V2 547 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 RHPN2Q8IUC4 686 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 LRRC45Q96CN5 670 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 NLRP4Q96MN2 994 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 TJP2Q9UDY2 1190 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 PCDHB2Q9Y5E7 798 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 MYO1CO00159 1063 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 CYP1A1P04798 512 aaPredicted RBP12.57□□□□□ -0.4
RHO-201ENST00000296271 CLTAP09496 248 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 IQCF3P0C7M6 154 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 CYP2C8P10632 490 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 BRD2P25440 801 aaKnown RBP12.57□□□□□ -0.4
RHO-201ENST00000296271 LSP1P33241 339 aa12.57□□□□□ -0.4
RHO-201ENST00000296271 SSR1P43307 286 aaKnown RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 72.7 ms