RNA–Protein interactions for RNA: ENST00000294119.6

UBXN1-201, Transcript of UBX domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene UBXN1, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-201ENST00000294119 TTPALQ9BTX7 342 aa17.3■□□□□ 0.36
UBXN1-201ENST00000294119 EIF2AQ9BY44 585 aaKnown RBP17.3■□□□□ 0.36
UBXN1-201ENST00000294119 ZFP14Q9HCL3 533 aa17.3■□□□□ 0.36
UBXN1-201ENST00000294119 BRMS1Q9HCU9 246 aa17.3■□□□□ 0.36
UBXN1-201ENST00000294119 CACNA2D2Q9NY47 1150 aa17.3■□□□□ 0.36
UBXN1-201ENST00000294119 ZMYM2Q9UBW7 1377 aa17.29■□□□□ 0.36
UBXN1-201ENST00000294119 FAM221BA6H8Z2 402 aa17.29■□□□□ 0.36
UBXN1-201ENST00000294119 RPP40O75818 363 aaKnown RBP17.29■□□□□ 0.36
UBXN1-201ENST00000294119 MICAL2O94851 1124 aa17.29■□□□□ 0.36
UBXN1-201ENST00000294119 PSMC3P17980 439 aa17.29■□□□□ 0.36
UBXN1-201ENST00000294119 GDI1P31150 447 aa17.29■□□□□ 0.36
UBXN1-201ENST00000294119 CIITAP33076 1130 aa17.29■□□□□ 0.36
UBXN1-201ENST00000294119 XKR3Q5GH77 459 aa17.29■□□□□ 0.36
UBXN1-201ENST00000294119 C1orf228Q6PIY5 440 aa17.29■□□□□ 0.36
UBXN1-201ENST00000294119 GIT1Q9Y2X7 761 aa17.29■□□□□ 0.36
UBXN1-201ENST00000294119 CYSRT1A8MQ03 144 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 ZSCAN22P10073 491 aaPredicted RBP17.28■□□□□ 0.36
UBXN1-201ENST00000294119 NLRP5P59047 1200 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 DGKKQ5KSL6 1271 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 DEPDC1BQ8WUY9 529 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 SH2D3AQ9BRG2 576 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 PAAF1Q9BRP4 392 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 ZSCAN16Q9H4T2 348 aaPredicted RBP17.28■□□□□ 0.36
UBXN1-201ENST00000294119 TRPV4Q9HBA0 871 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 ANKFY1Q9P2R3 1169 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 SEPT9Q9UHD8 586 aaPredicted RBP17.28■□□□□ 0.36
UBXN1-201ENST00000294119 TCEAL9Q9UHQ7 104 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 HES2Q9Y543 173 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 ATP6V1DQ9Y5K8 247 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 COL4A3BPQ9Y5P4 624 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 TENM4Q6N022 2769 aa17.28■□□□□ 0.36
UBXN1-201ENST00000294119 PCNX2A6NKB5 2137 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 LNP1A1A4G5 178 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 WDR27A2RRH5 827 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 VPS37CA5D8V6 355 aaPredicted RBP17.27■□□□□ 0.36
UBXN1-201ENST00000294119 ADAMTS3O15072 1205 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 EDIL3O43854 480 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 SFNP31947 248 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 GRIK3Q13003 919 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 CCINQ13939 588 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 HSP90AA2PQ14568 343 aaPredicted RBP17.27■□□□□ 0.36
UBXN1-201ENST00000294119 DAB2IPQ5VWQ8 1189 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 B3GNT9Q6UX72 402 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 REXO1Q8N1G1 1221 aaKnown RBP17.27■□□□□ 0.36
UBXN1-201ENST00000294119 DAGLBQ8NCG7 672 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 ADAM32Q8TC27 787 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 RABGGTAQ92696 567 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 CCDC51Q96ER9 411 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 VPS54Q9P1Q0 977 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 MTMR6Q9Y217 621 aa17.27■□□□□ 0.36
UBXN1-201ENST00000294119 ASCC3Q8N3C0 2202 aaKnown RBP17.27■□□□□ 0.35
UBXN1-201ENST00000294119 ARHGEF37A1IGU5 675 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 HYAL3O43820 417 aaPredicted RBP17.26■□□□□ 0.35
UBXN1-201ENST00000294119 TADA2AO75478 443 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 JAK3P52333 1124 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 PLK5Q496M5 336 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 PRR16Q569H4 304 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 FAM171A1Q5VUB5 890 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 TXNDC11Q6PKC3 985 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 RDM1Q8NG50 284 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 TCEAL4Q96EI5 215 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 AIFM3Q96NN9 605 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 RIT2Q99578 217 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 FOXP1Q9H334 677 aaPredicted RBP17.26■□□□□ 0.35
UBXN1-201ENST00000294119 UNC45AQ9H3U1 944 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 CACNG4Q9UBN1 327 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 KLK13Q9UKR3 277 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 CACNA1EQ15878 2313 aa17.26■□□□□ 0.35
UBXN1-201ENST00000294119 MYBPHLA2RUH7 354 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 CDX4O14627 284 aaPredicted RBP17.25■□□□□ 0.35
UBXN1-201ENST00000294119 MSH4O15457 936 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 PTPN2P17706 415 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 KRT2P35908 639 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 CCR2P41597 374 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 GNL2Q13823 731 aaKnown RBP17.25■□□□□ 0.35
UBXN1-201ENST00000294119 JAKMIP3Q5VZ66 844 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 PDXDC1Q6P996 788 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 ANO5Q75V66 913 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 BRAPQ7Z569 592 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 MFSD6LQ8IWD5 586 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 SYNPOQ8N3V7 929 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 SMARCD2Q92925 531 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 ZSWIM3Q96MP5 696 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 JPH2Q9BR39 696 aaPredicted RBP17.25■□□□□ 0.35
UBXN1-201ENST00000294119 DUSP15Q9H1R2 295 aaPredicted RBP17.25■□□□□ 0.35
UBXN1-201ENST00000294119 C8orf33Q9H7E9 229 aaPredicted RBP17.25■□□□□ 0.35
UBXN1-201ENST00000294119 MTRRQ9UBK8 725 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 PCDHA4Q9UN74 947 aa17.25■□□□□ 0.35
UBXN1-201ENST00000294119 ZNF263O14978 683 aa17.24■□□□□ 0.35
UBXN1-201ENST00000294119 EXTL3O43909 919 aa17.24■□□□□ 0.35
UBXN1-201ENST00000294119 TSPAN1O60635 241 aa17.24■□□□□ 0.35
UBXN1-201ENST00000294119 MOSPD3O75425 235 aa17.24■□□□□ 0.35
UBXN1-201ENST00000294119 KIF4AO95239 1232 aa17.24■□□□□ 0.35
UBXN1-201ENST00000294119 U2AF2P26368 475 aaKnown RBP eCLIP17.24■□□□□ 0.355e-8■■■□□ 16.8
UBXN1-201ENST00000294119 AXLP30530 894 aa17.24■□□□□ 0.35
UBXN1-201ENST00000294119 OR1D2P34982 312 aa17.24■□□□□ 0.35
UBXN1-201ENST00000294119 SPIRE1Q08AE8 756 aa17.24■□□□□ 0.35
UBXN1-201ENST00000294119 PCBP1Q15365 356 aaKnown RBP eCLIP17.24■□□□□ 0.35
UBXN1-201ENST00000294119 BLIDQ8IZY5 108 aa17.24■□□□□ 0.35
UBXN1-201ENST00000294119 PRPF31Q8WWY3 499 aaKnown RBP17.24■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms