RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 NUDCD1Q96RS6 583 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 KMT5AQ9NQR1 393 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 LCMT1Q9UIC8 334 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 CNMDO75829 334 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 RAD23BP54727 409 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 ACVR2BQ13705 512 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 IQSEC1Q6DN90 963 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 ANO3Q9BYT9 981 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 EPN3Q9H201 632 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 DNAJC17Q9NVM6 304 aaKnown RBP12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 ZBED1O96006 694 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 E4F1Q66K89 784 aaPredicted RBP12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 BBS5Q8N3I7 341 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 DCLK2Q8N568 766 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 METTL13Q8N6R0 699 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 KCTD6Q8NC69 237 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 SLC7A3Q8WY07 619 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 DEFB118Q96PH6 123 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 AGXT2Q9BYV1 514 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 ECT2Q9H8V3 914 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 KRT82Q9NSB4 513 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 PCDHA6Q9UN73 950 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 PCDHA8Q9Y5H6 950 aa12.55□□□□□ -0.4
SYNGAP1-201ENST00000293748 ESYT3A0FGR9 886 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 EIF3HO15372 352 aaKnown RBP eCLIP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 TLR3O15455 904 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 XPOTO43592 962 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 GH1P01241 217 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 GPC5P78333 572 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 CCZ1BP86790 482 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 CCZ1P86791 482 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 BYSLQ13895 437 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 TFDP1Q14186 410 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 MORN1Q5T089 497 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 CCNYQ8ND76 341 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 SYTL5Q8TDW5 730 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 ANKRD36BP1Q96IX9 119 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 CXorf56Q9H5V9 222 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 SUGCTQ9HAC7 445 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 NOC2LQ9Y3T9 749 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 NR2E3Q9Y5X4 410 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 KPNA6O60684 536 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 HSPA4LO95757 839 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 C6orf222P0C671 652 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 TXNP10599 105 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 MDH1P40925 334 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 CASP2P42575 452 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 CPT1AP50416 773 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 ARFIP2P53365 341 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 GIPC2Q8TF65 315 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 GFM2Q969S9 779 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 DTNBP1Q96EV8 351 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 FGD4Q96M96 766 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 TGS1Q96RS0 853 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 DDX47Q9H0S4 455 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 KCNF1Q9H3M0 494 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 TEX33O43247 280 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 OATP04181 439 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 MCF2P10911 925 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 CDC27P30260 824 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 ELF1P32519 619 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 PRCPP42785 496 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 FAM160B1Q5W0V3 765 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 BZW1Q7L1Q6 419 aaKnown RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 RASGRP2Q7LDG7 609 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 HIPK4Q8NE63 616 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 OR6J1Q8NGC5 347 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 KCNV2Q8TDN2 545 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 DEPDC1BQ8WUY9 529 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 XPNPEP3Q9NQH7 507 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 DNAJC12Q9UKB3 198 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 PRPSAP2O60256 369 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 IFRD2Q12894 506 aaPredicted RBP12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 FAM149B1Q96BN6 582 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 GLT1D1Q96MS3 346 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 PCIF1Q9H4Z3 704 aa12.54□□□□□ -0.4
SYNGAP1-201ENST00000293748 DDX60LQ5H9U9 1706 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 GSTA4O15217 222 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 MAFGO15525 162 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 SEPT4O43236 478 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 ZSCAN20P17040 1043 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 THOC5Q13769 683 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 DHX34Q14147 1143 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 IQCB1Q15051 598 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 NECAB2Q7Z6G3 386 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 ATP6V1E2Q96A05 226 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 TAAR1Q96RJ0 339 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 SENP1Q9P0U3 644 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 HDAC6Q9UBN7 1215 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 DDX20Q9UHI6 824 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 SNX12Q9UMY4 172 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 ANGPTL3Q9Y5C1 460 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 ORC2Q13416 577 aaPredicted RBP12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 TFDP2Q14188 446 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 SESTD1Q86VW0 696 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 THOC1Q96FV9 657 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 FBXL5Q9UKA1 691 aa12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 G3BP2Q9UN86 482 aaKnown RBP12.53□□□□□ -0.4
SYNGAP1-201ENST00000293748 RIPK3Q9Y572 518 aa12.53□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms