RNA–Protein interactions for RNA: ENST00000292779.3

CCDC116-201, Transcript of coiled-coil domain containing 116, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC116, Length 2,260 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116-201ENST00000292779 C2CD6Q53TS8 623 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 XKR3Q5GH77 459 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 LLGL2Q6P1M3 1020 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 MICALCLQ6ZW33 695 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 C1orf54Q8WWF1 131 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 ART4Q93070 314 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 TMEM143Q96AN5 459 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 FNBP1Q96RU3 617 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 LRRC19Q9H756 370 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 CLEC11AQ9Y240 323 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 PCDHB2Q9Y5E7 798 aa16.1■□□□□ 0.17
CCDC116-201ENST00000292779 PTPRJQ12913 1337 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 TLDC2A0PJX2 215 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 SMIM23A6NLE4 172 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 H0YCG3 227 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 PAEPP09466 180 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 SUPT20HL2P0C7V6 817 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 FGFR4P22455 802 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 RRM1P23921 792 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 POLGP54098 1239 aaPredicted RBP16.09■□□□□ 0.17
CCDC116-201ENST00000292779 FSTL1Q12841 308 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 MKRN4PQ13434 485 aaPredicted RBP16.09■□□□□ 0.17
CCDC116-201ENST00000292779 BYSLQ13895 437 aaKnown RBP16.09■□□□□ 0.17
CCDC116-201ENST00000292779 ZACNQ401N2 412 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 WDR44Q5JSH3 913 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 TDRD10Q5VZ19 366 aaKnown RBP16.09■□□□□ 0.17
CCDC116-201ENST00000292779 SPOPLQ6IQ16 392 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 UHMK1Q8TAS1 419 aaKnown RBP16.09■□□□□ 0.17
CCDC116-201ENST00000292779 MDM1Q8TC05 714 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 ZC3H15Q8WU90 426 aaKnown RBP16.09■□□□□ 0.17
CCDC116-201ENST00000292779 FAM81BQ96LP2 452 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 KIAA1586Q9HCI6 787 aa16.09■□□□□ 0.17
CCDC116-201ENST00000292779 AGO2Q9UKV8 859 aaKnown RBP16.09■□□□□ 0.17
CCDC116-201ENST00000292779 PEX10O60683 326 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 STAM2O75886 525 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 ECEL1O95672 775 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 C4BPAP04003 597 aaKnown RBP16.08■□□□□ 0.17
CCDC116-201ENST00000292779 ATP4AP20648 1035 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 PIK3CAP42336 1068 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 STRN3Q13033 797 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 SNX1Q13596 522 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 PPP1R7Q15435 360 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 SGO2Q562F6 1265 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 OTUD6BQ8N6M0 293 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 PGM2Q96G03 612 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 PLVAPQ9BX97 442 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 HAPLN2Q9GZV7 340 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 AVENQ9NQS1 362 aaPredicted RBP16.08■□□□□ 0.17
CCDC116-201ENST00000292779 HOXC10Q9NYD6 342 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 AFG3L2Q9Y4W6 797 aa16.08■□□□□ 0.17
CCDC116-201ENST00000292779 CNTN2Q02246 1040 aa16.08■□□□□ 0.16
CCDC116-201ENST00000292779 QPCTQ16769 361 aa16.08■□□□□ 0.16
CCDC116-201ENST00000292779 NOL9Q5SY16 702 aaKnown RBP16.08■□□□□ 0.16
CCDC116-201ENST00000292779 CRELD2Q6UXH1 353 aaPredicted RBP16.08■□□□□ 0.16
CCDC116-201ENST00000292779 ZNF677Q86XU0 584 aa16.08■□□□□ 0.16
CCDC116-201ENST00000292779 ASAP3Q8TDY4 903 aa16.08■□□□□ 0.16
CCDC116-201ENST00000292779 ZBTB45Q96K62 511 aaPredicted RBP16.08■□□□□ 0.16
CCDC116-201ENST00000292779 AZI2Q9H6S1 392 aa16.08■□□□□ 0.16
CCDC116-201ENST00000292779 CNOT10Q9H9A5 744 aaKnown RBP16.08■□□□□ 0.16
CCDC116-201ENST00000292779 ELP3Q9H9T3 547 aa16.08■□□□□ 0.16
CCDC116-201ENST00000292779 STYXL1Q9Y6J8 313 aa16.08■□□□□ 0.16
CCDC116-201ENST00000292779 SIP14410 1827 aa16.08■□□□□ 0.16
CCDC116-201ENST00000292779 IQCA1LA6NCM1 817 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 RIPK2O43353 540 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 VNN1O95497 513 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 ABCD1P33897 745 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 SLMAPQ14BN4 828 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 CYP1A1P04798 512 aaPredicted RBP16.07■□□□□ 0.16
CCDC116-201ENST00000292779 CFHP08603 1231 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 MYBL1P10243 752 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 RARGP13631 454 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 GLRA2P23416 452 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 NSFP46459 744 aaKnown RBP16.07■□□□□ 0.16
CCDC116-201ENST00000292779 BPIFB4P59827 614 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 CENPCQ03188 943 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 KRT17Q04695 432 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 IFT88Q13099 833 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 STXBP2Q15833 593 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 ZBTB41Q5SVQ8 909 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 DAB2IPQ5VWQ8 1189 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 YTHDF3Q7Z739 585 aaKnown RBP16.07■□□□□ 0.16
CCDC116-201ENST00000292779 CCDC25Q86WR0 208 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 C3orf20Q8ND61 904 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 ATG4AQ8WYN0 398 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 SLCO2A1Q92959 643 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 HERPUD2Q9BSE4 406 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 ZNF302Q9NR11 478 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 CHST7Q9NS84 486 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 DDX20Q9UHI6 824 aaKnown RBP16.07■□□□□ 0.16
CCDC116-201ENST00000292779 GGA2Q9UJY4 613 aa16.07■□□□□ 0.16
CCDC116-201ENST00000292779 MAFBQ9Y5Q3 323 aaPredicted RBP16.07■□□□□ 0.16
CCDC116-201ENST00000292779 LRRIQ4A6NIV6 560 aa16.06■□□□□ 0.16
CCDC116-201ENST00000292779 RGS16O15492 202 aaPredicted RBP16.06■□□□□ 0.16
CCDC116-201ENST00000292779 ACO1P21399 889 aaKnown RBP16.06■□□□□ 0.16
CCDC116-201ENST00000292779 SSTR3P32745 418 aaPredicted RBP16.06■□□□□ 0.16
CCDC116-201ENST00000292779 CDR1P51861 262 aa16.06■□□□□ 0.16
CCDC116-201ENST00000292779 IFI35P80217 286 aaPredicted RBP16.06■□□□□ 0.16
CCDC116-201ENST00000292779 CALCOCO2Q13137 446 aa16.06■□□□□ 0.16
CCDC116-201ENST00000292779 C6orf89Q6UWU4 347 aa16.06■□□□□ 0.16
CCDC116-201ENST00000292779 SEPT14Q6ZU15 432 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms