RNA–Protein interactions for RNA: ENST00000290650.8

UBR1-201, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBR1, Length 7,761 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-201ENST00000290650 LGSNQ5TDP6 509 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 OTOP1Q7RTM1 612 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 ZNF720Q7Z2F6 126 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 PRPF31Q8WWY3 499 aaKnown RBP5.07□□□□□ -1.6
UBR1-201ENST00000290650 CCT6BQ92526 530 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 RUNDC3BQ96NL0 473 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 CEP41Q9BYV8 373 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 HSD3B7Q9H2F3 369 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 SPC25Q9HBM1 224 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 GPATCH2LQ9NWQ4 482 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 AFG3L2Q9Y4W6 797 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 DCCP43146 1447 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 F8VZ95 297 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 ATP9BO43861 1147 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 CYP2B6P20813 491 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 SNX16P57768 344 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 ANO4Q32M45 955 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 TSEN2Q8NCE0 465 aaKnown RBP5.07□□□□□ -1.6
UBR1-201ENST00000290650 HVCN1Q96D96 273 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 CFAP57Q96MR6 1250 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 DDX23Q9BUQ8 820 aaKnown RBP5.07□□□□□ -1.6
UBR1-201ENST00000290650 CYP26B1Q9NR63 512 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 TARSL2A2RTX5 802 aaKnown RBP5.07□□□□□ -1.6
UBR1-201ENST00000290650 ANKRD63C9JTQ0 380 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 PDHA1P08559 390 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 ARL4AP40617 200 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 MAGEA9P43362 315 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 GCLCP48506 637 aaPredicted RBP5.07□□□□□ -1.6
UBR1-201ENST00000290650 ITGA8P53708 1063 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 CCNA1P78396 465 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 TTLL4Q14679 1199 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 SH2D4BQ5SQS7 431 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 APOBEC3FQ8IUX4 373 aaKnown RBP5.07□□□□□ -1.6
UBR1-201ENST00000290650 MAP7D3Q8IWC1 876 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 OR6J1Q8NGC5 347 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 BHMTQ93088 406 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 SHISA4Q96DD7 197 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 TRIM11Q96F44 468 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 CCT8L2Q96SF2 557 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 PXMP2Q9NR77 195 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 CHMP2BQ9UQN3 213 aa5.07□□□□□ -1.6
UBR1-201ENST00000290650 SSU72P8A0A1W2PR75 194 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 PODXLO00592 558 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 HMBSP08397 361 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 RRM1P23921 792 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 TM4SF1P30408 202 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 LSP1P33241 339 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 MAP2K2P36507 400 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 RASSF2P50749 326 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 EIF3EP60228 445 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 ZNF473Q8WTR7 871 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 SNF8Q96H20 258 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 FAM167BQ9BTA0 163 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 WNT8AQ9H1J5 351 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 VPS11Q9H270 941 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 AGO4Q9HCK5 861 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 NPHS2Q9NP85 383 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 SPATA31A6Q5VVP1 1343 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 SETSIPP0DME0 302 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 KRT3P12035 628 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 ADCY2Q08462 1091 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 STYK1Q6J9G0 422 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 LRRC31Q6UY01 552 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 EFCAB13Q8IY85 973 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 PDIK1LQ8N165 341 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 FAM71DQ8N9W8 422 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 RAB3IL1Q8TBN0 382 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 SYTL5Q8TDW5 730 aaPredicted RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 PWWP2AQ96N64 755 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 MTMR9Q96QG7 549 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 CYP4F11Q9HBI6 524 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 KLHL8Q9P2G9 620 aaPredicted RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 FAM8A1Q9UBU6 413 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 POLIQ9UNA4 740 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 WDR3Q9UNX4 943 aaKnown RBP eCLIP5.06□□□□□ -1.6
UBR1-201ENST00000290650 A0A1W2PQJ5 194 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 FOXO6A8MYZ6 492 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 DFFAO00273 331 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 PHKA2P46019 1235 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 IRAK1P51617 712 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 TMPRSS15P98073 1019 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 ALCAMQ13740 583 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 GLE1Q53GS7 698 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 SH3RF1Q7Z6J0 888 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 TADA2BQ86TJ2 420 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 RHOT1Q8IXI2 618 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 SLC17A8Q8NDX2 589 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 UNKQ9C0B0 810 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 PARVAQ9NVD7 372 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 SLIT3O75094 1523 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 CCDC88AQ3V6T2 1871 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 SETD1AO15047 1707 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 NKRFO15226 690 aaKnown RBP eCLIP5.06□□□□□ -1.6
UBR1-201ENST00000290650 LDHAP00338 332 aaKnown RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 MARCKSL1P49006 195 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 TPD52P55327 224 aaPredicted RBP5.06□□□□□ -1.6
UBR1-201ENST00000290650 UGCGQ16739 394 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 EDRF1Q3B7T1 1238 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 PPFIBP2Q8ND30 876 aa5.06□□□□□ -1.6
UBR1-201ENST00000290650 SHCBP1LQ9BZQ2 653 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms