RNA–Protein interactions for RNA: ENST00000289292.11

SHROOM4-201, Transcript of shroom family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHROOM4, Length 6,261 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4-201ENST00000289292 ATG4AQ8WYN0 398 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 TMEM143Q96AN5 459 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 DNAJC7Q99615 494 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 VCPKMTQ9H867 229 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 ZNF229Q9UJW7 825 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 ASAP2O43150 1006 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 MOCS2O96007 188 aaPredicted RBP16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 MED21Q13503 144 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 C2CD6Q53TS8 623 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 CLEC4GQ6UXB4 293 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 TBRG4Q969Z0 631 aaKnown RBP eCLIP16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 TUFT1Q9NNX1 390 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 CPS1P31327 1500 aa16.15■□□□□ 0.18
SHROOM4-201ENST00000289292 KRT76Q01546 638 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 IMPG1Q17R60 797 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 PID1Q7Z2X4 250 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 NUP93Q8N1F7 819 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 ZC4H2Q9NQZ6 224 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 RNF146Q9NTX7 359 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 L1RE1Q9UN81 338 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 MYL3P08590 195 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 AP5M1Q9H0R1 490 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 UBA6A0AVT1 1052 aaPredicted RBP16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 ZNF200P98182 395 aaPredicted RBP16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 CYP4A22Q5TCH4 519 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 RBM43Q6ZSC3 357 aaKnown RBP16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 CNBD2Q96M20 576 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 SIK2Q9H0K1 926 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 FLT1P17948 1338 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 MANSC1Q9H8J5 431 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 ZC3H7BQ9UGR2 993 aaKnown RBP16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 ERCC6L2Q5T890 1561 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 A0A087X0T9 212 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 TYW5A2RUC4 315 aaKnown RBP16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 XPO1O14980 1071 aaKnown RBP16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 FAM228BP0C875 321 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 AARSP49588 968 aaKnown RBP eCLIP16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 PMS1P54277 932 aaKnown RBP16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 SNRNP35Q16560 246 aaKnown RBP16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 TRIM72Q6ZMU5 477 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 CYGBQ8WWM9 190 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 LCMT1Q9UIC8 334 aa16.14■□□□□ 0.17
SHROOM4-201ENST00000289292 ATP8B3O60423 1300 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 NQO1P15559 274 aaKnown RBP16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 MAD2L2Q9UI95 211 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 CHI3L2Q15782 390 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 SCG3Q8WXD2 468 aaKnown RBP16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 MRPL4Q9BYD3 311 aaKnown RBP16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 LACRTQ9GZZ8 138 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 MTMR4Q9NYA4 1195 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 ZFATQ9P243 1243 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 CAMSAP1Q5T5Y3 1602 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 POLRMTO00411 1230 aaKnown RBP16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 NFX1Q12986 1120 aaKnown RBP16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 EPHA7Q15375 998 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 TRIP10Q15642 601 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 WDR93Q6P2C0 686 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 SCN4BQ8IWT1 228 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 USP33Q8TEY7 942 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 ASCC2Q9H1I8 757 aaPredicted RBP16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 A0A0U1RQJ8 604 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 WEE2P0C1S8 567 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 RALAP11233 206 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 CIITAP33076 1130 aa16.13■□□□□ 0.17
SHROOM4-201ENST00000289292 ZSCAN5CA6NGD5 496 aaPredicted RBP16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 AKAP10O43572 662 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 CACNB2Q08289 660 aaPredicted RBP16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 ST3GAL1Q11201 340 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 RCN1Q15293 331 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 FLAD1Q8NFF5 587 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 SPDYE1Q8NFV5 336 aaPredicted RBP16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 DTNBP1Q96EV8 351 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 DDX28Q9NUL7 540 aaKnown RBP16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 AFF4Q9UHB7 1163 aaKnown RBP16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 ZHX2Q9Y6X8 837 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 ASNSP08243 561 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 TMEM253P0C7T8 217 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 ZFXP17010 805 aaPredicted RBP16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 ZNF543Q08ER8 600 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 SEMA3FQ13275 785 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 ENOSF1Q7L5Y1 443 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 LOC100653049A0A140TA62 436 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 KRT34O76011 436 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 SULT1E1P49888 294 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 LDHDQ86WU2 507 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 SNX19Q92543 992 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 THAP11Q96EK4 314 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 PHTF1Q9UMS5 762 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 RPS6KA4O75676 772 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 GLI1P08151 1106 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 COBLL1Q53SF7 1204 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 C20orf96Q9NUD7 363 aaPredicted RBP16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 SENP1Q9P0U3 644 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 UVRAGQ9P2Y5 699 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 A8MXQ7 604 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 SFNP31947 248 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 TEDDM1Q5T9Z0 273 aa16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 RBBP8NLQ8NC74 664 aaPredicted RBP16.12■□□□□ 0.17
SHROOM4-201ENST00000289292 ERGIC2Q96RQ1 377 aa16.12■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms