RNA–Protein interactions for RNA: ENST00000288976.3

PTPDC1-201, Transcript of protein tyrosine phosphatase domain containing 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene PTPDC1, Length 4,398 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPDC1-201ENST00000288976 MXI1P50539 228 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 ZSWIM2Q8NEG5 633 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 JAKMIP2Q96AA8 810 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 AGO3Q9H9G7 860 aaKnown RBP9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 SLC38A7Q9NVC3 462 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 POLIQ9UNA4 740 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 CITO14578 2027 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 CARNS1A5YM72 827 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 HOXA2O43364 376 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 TNNC2P02585 160 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 ACOT2P49753 483 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 GPNMBQ14956 572 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 ZACNQ401N2 412 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 TWF2Q6IBS0 349 aaKnown RBP9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 SLC24A5Q71RS6 500 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 ZNF598Q86UK7 904 aaKnown RBP9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 TMEM199Q8N511 208 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 EHBP1Q8NDI1 1231 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 UROC1Q96N76 676 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 HTATIP2Q9BUP3 242 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 TTYH3Q9C0H2 523 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 TMEM117Q9H0C3 514 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 VRTNQ9H8Y1 702 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 CEP72Q9P209 647 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 TTLL3Q9Y4R7 772 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 NFX1Q12986 1120 aaKnown RBP9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 ZBTB41Q5SVQ8 909 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 ENOSF1Q7L5Y1 443 aa9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 RPUSD2Q8IZ73 545 aaKnown RBP9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 SYN2Q92777 582 aaPredicted RBP9.08□□□□□ -0.96
PTPDC1-201ENST00000288976 AKR1B10O60218 316 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 ITGA4P13612 1032 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 ATN1P54259 1190 aaPredicted RBP9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 ZBTB6Q15916 424 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 EXOC3L4Q17RC7 722 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 DUOXA2Q1HG44 320 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 MFSD5Q6N075 450 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 PRDM5Q9NQX1 630 aaPredicted RBP9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 LACTBL1A8MY62 500 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 C9IYK1 514 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 MEFVO15553 781 aaPredicted RBP9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 CXCL8P10145 99 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 DLG4P78352 724 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 PPP3CAQ08209 521 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 TMEM132DQ14C87 1099 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 SLC10A6Q3KNW5 377 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 DPY19L2P1Q6NXN4 242 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 ECHDC2Q86YB7 292 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 FBXL13Q8NEE6 735 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 INTS2Q9H0H0 1204 aaKnown RBP9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 TSPYL1Q9H0U9 437 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 GCNT4Q9P109 453 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 UBQLN1Q9UMX0 589 aaKnown RBP9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 CSDE1O75534 798 aaKnown RBP9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 TSC2P49815 1807 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 SMC1AQ14683 1233 aaKnown RBP9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 THNSL1Q8IYQ7 743 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 FAM193BQ96PV7 902 aaPredicted RBP9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 NAA15Q9BXJ9 866 aaKnown RBP9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 SLITRK6Q9H5Y7 841 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 TMEM161AQ9NX61 479 aa9.07□□□□□ -0.96
PTPDC1-201ENST00000288976 ABHD14A-ACY1A0A1B0GW23 586 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 TEX33O43247 280 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 MGEA5O60502 916 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 EZRP15311 586 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 EN2P19622 333 aaPredicted RBP9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 PON1P27169 355 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 KCNMA1Q12791 1236 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 CBWD6Q4V339 395 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 HS1BP3Q53T59 392 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 CBWD3Q5JTY5 395 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 CBWD5Q5RIA9 395 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 KIAA1841Q6NSI8 718 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 NPAS4Q8IUM7 802 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 CNGA4Q8IV77 575 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 BEST2Q8NFU1 509 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 LMO3Q8TAP4 145 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 GANQ9H2C0 597 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 NXF3Q9H4D5 531 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 SNTG2Q9NY99 539 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 CAPN11Q9UMQ6 739 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 SCN5AQ14524 2016 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 RECQL4O94761 1208 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 FAM163BP0C2L3 166 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 CD19P15391 556 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 FECHP22830 423 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 PPIGQ13427 754 aaKnown RBP eCLIP9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 TDRD10Q5VZ19 366 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 JADE1Q6IE81 842 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 CRIPAKQ8N1N5 446 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 RDH13Q8NBN7 331 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 NEK11Q8NG66 645 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 LINC01599Q8WXQ3 324 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 ZBTB9Q96C00 473 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 PPP1R10Q96QC0 940 aaKnown RBP9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 PDE11AQ9HCR9 933 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 SIX2Q9NPC8 291 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 HTTP42858 3142 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 NCOR1O75376 2440 aa9.06□□□□□ -0.96
PTPDC1-201ENST00000288976 TRIM43BA6NCK2 446 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms