RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 BBOF1Q8ND07 529 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 ZSWIM2Q8NEG5 633 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 VCXQ9H320 206 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 RNF181Q9P0P0 153 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 GINS2Q9Y248 185 aa14.22□□□□□ -0.13
SCAF4-201ENST00000286835 CLK2P49760 499 aaKnown RBP14.21□□□□□ -0.13
SCAF4-201ENST00000286835 WLSQ5T9L3 541 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 AMIGO3Q86WK7 504 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 TAS1R2Q8TE23 839 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 RSAD2Q8WXG1 361 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 MAML1Q92585 1016 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 RPS6KC1Q96S38 1066 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 MYLK2Q9H1R3 596 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 BATF3Q9NR55 127 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 FBXO28Q9NVF7 368 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 NINJ2Q9NZG7 142 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 NEU2Q9Y3R4 380 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 NCANO14594 1321 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 TLR3O15455 904 aaKnown RBP14.21□□□□□ -0.13
SCAF4-201ENST00000286835 GYG2O15488 501 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 DCTN3O75935 186 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 EPHB2P29323 1055 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 CPA2P48052 419 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 LIG4P49917 911 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 BASP1P80723 227 aaKnown RBP14.21□□□□□ -0.13
SCAF4-201ENST00000286835 CDR2Q01850 454 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 SPP2Q13103 211 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 C1orf186Q6ZWK4 172 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 PIGWQ7Z7B1 504 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 FBXL13Q8NEE6 735 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 PYROXD1Q8WU10 500 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 NAF1Q96HR8 494 aaKnown RBP14.21□□□□□ -0.13
SCAF4-201ENST00000286835 WRNIP1Q96S55 665 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 MPHOSPH6Q99547 160 aaKnown RBP14.21□□□□□ -0.13
SCAF4-201ENST00000286835 AS3MTQ9HBK9 375 aa14.21□□□□□ -0.13
SCAF4-201ENST00000286835 FRMD4AQ9P2Q2 1039 aaPredicted RBP14.21□□□□□ -0.13
SCAF4-201ENST00000286835 YWHAGP61981 247 aaKnown RBP eCLIP14.21□□□□□ -0.14
SCAF4-201ENST00000286835 C11orf63Q6NUN7 778 aa14.21□□□□□ -0.14
SCAF4-201ENST00000286835 OTOP1Q7RTM1 612 aa14.21□□□□□ -0.14
SCAF4-201ENST00000286835 SAMD7Q7Z3H4 446 aa14.21□□□□□ -0.14
SCAF4-201ENST00000286835 EPS8L1Q8TE68 723 aa14.21□□□□□ -0.14
SCAF4-201ENST00000286835 CEP170P1Q96L14 293 aa14.21□□□□□ -0.14
SCAF4-201ENST00000286835 OSBPL8Q9BZF1 889 aa14.21□□□□□ -0.14
SCAF4-201ENST00000286835 GTF3C4Q9UKN8 822 aa14.21□□□□□ -0.14
SCAF4-201ENST00000286835 USH1CQ9Y6N9 552 aa14.21□□□□□ -0.14
SCAF4-201ENST00000286835 ALS2Q96Q42 1657 aa14.21□□□□□ -0.14
SCAF4-201ENST00000286835 ZSCAN5DPP0CG00 497 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 PTGIRP43119 386 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 SOX10P56693 466 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 IRX4P78413 519 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 PRMT6Q96LA8 375 aaPredicted RBP14.2□□□□□ -0.14
SCAF4-201ENST00000286835 ZWILCHQ9H900 591 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 PCYOX1Q9UHG3 505 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 MYH1P12882 1939 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 MYH4Q9Y623 1939 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 CCDC160A6NGH7 325 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 IWS1Q96ST2 819 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 TMEM39BQ9GZU3 492 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 UVRAGQ9P2Y5 699 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 KITP10721 976 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 ESRRAP11474 423 aaPredicted RBP14.2□□□□□ -0.14
SCAF4-201ENST00000286835 STAT4Q14765 748 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 Q4G0T1 1027 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 EMC10Q5UCC4 262 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 ARHGEF16Q5VV41 709 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 LVRNQ6Q4G3 990 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 MICALL2Q8IY33 904 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 CYP4X1Q8N118 509 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 CERS5Q8N5B7 392 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 CKAP2Q8WWK9 683 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 DLGAP2Q9P1A6 1054 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 ZHX2Q9Y6X8 837 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 IVNS1ABPQ9Y6Y0 642 aa14.2□□□□□ -0.14
SCAF4-201ENST00000286835 TXNDC9O14530 226 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 SNHG28P0DPA3 235 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 CTCFP49711 727 aaPredicted RBP14.19□□□□□ -0.14
SCAF4-201ENST00000286835 STYK1Q6J9G0 422 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 FOXR2Q6PJQ5 311 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 ACER1Q8TDN7 264 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 ART4Q93070 314 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 WDR18Q9BV38 432 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 IL1R1P14778 569 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 RASIP1Q5U651 963 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 NCAPG2Q86XI2 1143 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 SPON1Q9HCB6 807 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 NYAP2Q9P242 653 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 SLC12A4Q9UP95 1085 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 SUGT1Q9Y2Z0 365 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 PCDHA3Q9Y5H8 950 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 RFX1P22670 979 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 CCNHP51946 323 aaPredicted RBP14.19□□□□□ -0.14
SCAF4-201ENST00000286835 DRG2P55039 364 aaKnown RBP14.19□□□□□ -0.14
SCAF4-201ENST00000286835 SMAD1Q15797 465 aaKnown RBP14.19□□□□□ -0.14
SCAF4-201ENST00000286835 SUPT20HL1Q3ZLR7 823 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 TMEM154Q6P9G4 183 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 POTEAQ6S8J7 498 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 CENPUQ71F23 418 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 MAGEB18Q96M61 343 aa14.19□□□□□ -0.14
SCAF4-201ENST00000286835 R3HDM2Q9Y2K5 976 aaKnown RBP14.19□□□□□ -0.14
SCAF4-201ENST00000286835 ARHGAP42A6NI28 874 aa14.19□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms