RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 FBF1Q8TES7 1133 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 DDX1Q92499 740 aaKnown RBP11.05□□□□□ -0.64
SKA1-201ENST00000285116 MASTLQ96GX5 879 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 KREMEN1Q96MU8 473 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 NUP85Q9BW27 656 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 TMEM117Q9H0C3 514 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 PNMA3Q9UL41 463 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 ADGRA3Q8IWK6 1321 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 ZC3H11AO75152 810 aaKnown RBP eCLIP11.05□□□□□ -0.64
SKA1-201ENST00000285116 SGPL1O95470 568 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 MYBL1P10243 752 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 GNAZP19086 355 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 IVDP26440 423 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 SLCO1A2P46721 670 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 CENPCQ03188 943 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 RRP1BQ14684 758 aaKnown RBP11.05□□□□□ -0.64
SKA1-201ENST00000285116 RNF43Q68DV7 783 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 CWF19L1Q69YN2 538 aaKnown RBP11.05□□□□□ -0.64
SKA1-201ENST00000285116 ACAD10Q6JQN1 1059 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 AADACL2Q6P093 401 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 RNF207Q6ZRF8 634 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 SNF8Q96H20 258 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 FBXL18Q96ME1 805 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 SEPT11Q9NVA2 429 aaKnown RBP11.05□□□□□ -0.64
SKA1-201ENST00000285116 NEU2Q9Y3R4 380 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 GJA3Q9Y6H8 435 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 CLRN2A0PK11 232 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 GRIN3BO60391 1043 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 UNC5CO95185 931 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 GDF11O95390 407 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 ARP10275 920 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 ACVR2BQ13705 512 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 MESDQ14696 234 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 PARP6Q2NL67 630 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 ZNF677Q86XU0 584 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 CCDC105Q8IYK2 499 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 PLEKHO2Q8TD55 490 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 HELQQ8TDG4 1101 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 CKAP2Q8WWK9 683 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 KCNN1Q92952 543 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 TRIM11Q96F44 468 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 TMEM8AQ9HCN3 771 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 PAPOLBQ9NRJ5 636 aaKnown RBP11.05□□□□□ -0.64
SKA1-201ENST00000285116 TXLNGQ9NUQ3 528 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 MAP3K20Q9NYL2 800 aaKnown RBP11.05□□□□□ -0.64
SKA1-201ENST00000285116 KLHL14Q9P2G3 628 aa11.05□□□□□ -0.64
SKA1-201ENST00000285116 TMEM120BA0PK00 339 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 DPPA5A6NC42 116 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 ANKRD63C9JTQ0 380 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 DHX15O43143 795 aaKnown RBP11.04□□□□□ -0.64
SKA1-201ENST00000285116 NPTXRO95502 500 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 TTC4O95801 387 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 ABHD2P08910 425 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 CYP11B1P15538 503 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 CALB2P22676 271 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 RARRES1P49788 294 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 SLC18A1P54219 525 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 ROR2Q01974 943 aaKnown RBP11.04□□□□□ -0.64
SKA1-201ENST00000285116 LBRQ14739 615 aaKnown RBP11.04□□□□□ -0.64
SKA1-201ENST00000285116 LRRC14Q15048 493 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 VSTM1Q6UX27 236 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 ADAT2Q7Z6V5 191 aaKnown RBP11.04□□□□□ -0.64
SKA1-201ENST00000285116 CDAN1Q8IWY9 1227 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 RIBC1Q8N443 379 aaPredicted RBP11.04□□□□□ -0.64
SKA1-201ENST00000285116 BBOF1Q8ND07 529 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 KCNV2Q8TDN2 545 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 KIFAP3Q92845 792 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 CDC42EP4Q9H3Q1 356 aaKnown RBP11.04□□□□□ -0.64
SKA1-201ENST00000285116 RNPEPL1Q9HAU8 725 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 EXOC7Q9UPT5 735 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 TCRBV7S2A1N4TA0A589 114 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 CHMP2AO43633 222 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 SMIM24O75264 130 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 ATP5HO75947 161 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 CFBP00751 764 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 FGFR4P22455 802 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 RPS6KA3P51812 740 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 CLEC16AQ2KHT3 1053 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 ANO7Q6IWH7 933 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 UHMK1Q8TAS1 419 aaKnown RBP11.04□□□□□ -0.64
SKA1-201ENST00000285116 MGARPQ8TDB4 240 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 ARHGEF2Q92974 986 aaKnown RBP11.04□□□□□ -0.64
SKA1-201ENST00000285116 GRAMD1AQ96CP6 724 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 MFSD14AQ96MC6 490 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 TMX4Q9H1E5 349 aaPredicted RBP11.04□□□□□ -0.64
SKA1-201ENST00000285116 ETNK1Q9HBU6 452 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 EURLQ9NYK6 297 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 CTNNAL1Q9UBT7 734 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 TRIM33Q9UPN9 1127 aa11.04□□□□□ -0.64
SKA1-201ENST00000285116 SPOPO43791 374 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 EGFRP00533 1210 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 ATP6V1C1P21283 382 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 PCK1P35558 622 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 GCLMP48507 274 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 MXRA7P84157 204 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 GCNT1Q02742 428 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 PDCD2Q16342 344 aaPredicted RBP11.03□□□□□ -0.64
SKA1-201ENST00000285116 SGSM1Q2NKQ1 1148 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 KRT39Q6A163 491 aa11.03□□□□□ -0.64
SKA1-201ENST00000285116 TRIM68Q6AZZ1 485 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms