RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 KLHL14Q9P2G3 628 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 ZNF112Q9UJU3 913 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 RABGAP1Q9Y3P9 1069 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 PHIPQ8WWQ0 1821 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 GNAZP19086 355 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 ATP4AP20648 1035 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 WDR4P57081 412 aaKnown RBP12.09□□□□□ -0.47
SCLT1-201ENST00000281142 DNAJC3Q13217 504 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 KIF22Q14807 665 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 GNPTABQ3T906 1256 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 CWF19L1Q69YN2 538 aaKnown RBP12.09□□□□□ -0.47
SCLT1-201ENST00000281142 C11orf63Q6NUN7 778 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 PHLDB2Q86SQ0 1253 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 RHOT2Q8IXI1 618 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 GBP7Q8N8V2 638 aaPredicted RBP12.09□□□□□ -0.47
SCLT1-201ENST00000281142 LMO3Q8TAP4 145 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 CD101Q93033 1021 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 C9orf72Q96LT7 481 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 CCDC17Q96LX7 622 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 ROPN1BQ9BZX4 212 aaPredicted RBP12.09□□□□□ -0.47
SCLT1-201ENST00000281142 PCIF1Q9H4Z3 704 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 ZNF408Q9H9D4 720 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 ROPN1Q9HAT0 212 aaPredicted RBP12.09□□□□□ -0.47
SCLT1-201ENST00000281142 SMCHD1A6NHR9 2005 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 MIF4GDA9UHW6 222 aaKnown RBP12.09□□□□□ -0.47
SCLT1-201ENST00000281142 O00370 1275 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 MSH4O15457 936 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 FAM13AO94988 1023 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 RTN3O95197 1032 aaPredicted RBP12.09□□□□□ -0.47
SCLT1-201ENST00000281142 NEFHP12036 1026 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 HOXA13P31271 388 aaPredicted RBP12.09□□□□□ -0.47
SCLT1-201ENST00000281142 CTCFP49711 727 aaPredicted RBP12.09□□□□□ -0.47
SCLT1-201ENST00000281142 ITGA8P53708 1063 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 GPC5P78333 572 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 CYP1B1Q16678 543 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 SERPINB12Q96P63 405 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 EIF2AK1Q9BQI3 630 aaKnown RBP12.09□□□□□ -0.47
SCLT1-201ENST00000281142 NINJ2Q9NZG7 142 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 ZBTB21Q9ULJ3 1066 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 NAALADL1Q9UQQ1 740 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 CHKBQ9Y259 395 aa12.09□□□□□ -0.47
SCLT1-201ENST00000281142 CBX6O95503 412 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 GNAT1P11488 350 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 EPHB2P29323 1055 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 PAPOLAP51003 745 aaKnown RBP12.08□□□□□ -0.48
SCLT1-201ENST00000281142 MTFR1Q15390 333 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 PDCD2Q16342 344 aaPredicted RBP12.08□□□□□ -0.48
SCLT1-201ENST00000281142 RHBDF2Q6PJF5 856 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 TRMT10CQ7L0Y3 403 aaKnown RBP12.08□□□□□ -0.48
SCLT1-201ENST00000281142 SLFN12Q8IYM2 578 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 DRAXINQ8NBI3 349 aaPredicted RBP12.08□□□□□ -0.48
SCLT1-201ENST00000281142 FAM13CQ8NE31 585 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 RUNDC3BQ96NL0 473 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 PITPNM3Q9BZ71 974 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 TRIM7Q9C029 511 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 KIAA1683Q9H0B3 1180 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 AGPAT3Q9NRZ7 376 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 THAP12O43422 761 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 HIP1RO75146 1068 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 ENTPD5O75356 428 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 TTC4O95801 387 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 PYGLP06737 847 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 TMEM179Q6ZVK1 233 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 CYFIP1Q7L576 1253 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 CROCCP2Q86T23 111 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 NOP9Q86U38 636 aaKnown RBP12.08□□□□□ -0.48
SCLT1-201ENST00000281142 VSIG1Q86XK7 387 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 TPH2Q8IWU9 490 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.08□□□□□ -0.48
SCLT1-201ENST00000281142 ERMNQ8TAM6 284 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 SPIRE2Q8WWL2 714 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 MBOAT7Q96N66 472 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 FAM210AQ96ND0 272 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 FIZ1Q96SL8 496 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 NUP85Q9BW27 656 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 PAPOLBQ9NRJ5 636 aaKnown RBP12.08□□□□□ -0.48
SCLT1-201ENST00000281142 VAV3Q9UKW4 847 aa12.08□□□□□ -0.48
SCLT1-201ENST00000281142 CYP3A7-CYP3A51PA0A087WV96 503 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 HSPA6P17066 643 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 CYP3A7P24462 503 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 IVDP26440 423 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 TMED2Q15363 201 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 HP1BP3Q5SSJ5 553 aaPredicted RBP12.07□□□□□ -0.48
SCLT1-201ENST00000281142 RNF43Q68DV7 783 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 SIAH1Q8IUQ4 282 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 CRYGNQ8WXF5 182 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 SYT15Q9BQS2 421 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 RNPEPL1Q9HAU8 725 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 GRID1Q9ULK0 1009 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 R3HDM2Q9Y2K5 976 aaKnown RBP12.07□□□□□ -0.48
SCLT1-201ENST00000281142 EMSYQ7Z589 1322 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 TPBGLP0DKB5 382 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 GCLMP48507 274 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 PPP3CAQ08209 521 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 SGO2Q562F6 1265 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 LLGL2Q6P1M3 1020 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 INTS8Q75QN2 995 aaKnown RBP12.07□□□□□ -0.48
SCLT1-201ENST00000281142 MFN1Q8IWA4 741 aa12.07□□□□□ -0.48
SCLT1-201ENST00000281142 ZNF564Q8TBZ8 553 aaPredicted RBP12.07□□□□□ -0.48
SCLT1-201ENST00000281142 MAGEB18Q96M61 343 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms