RNA–Protein interactions for RNA: ENST00000276201.6

UPF3B-201, Transcript of UPF3B, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3B, Length 2,378 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3B-201ENST00000276201 CTNNA2P26232 953 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 SLC12A3P55017 1021 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 ARID5AQ03989 594 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 GJC2Q5T442 439 aaPredicted RBP11.04□□□□□ -0.64
UPF3B-201ENST00000276201 LRCH2Q5VUJ6 765 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 ARHGEF16Q5VV41 709 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 TRMT10CQ7L0Y3 403 aaKnown RBP11.04□□□□□ -0.64
UPF3B-201ENST00000276201 CYFIP1Q7L576 1253 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 NSMCE1Q8WV22 266 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 TYW1Q9NV66 732 aaKnown RBP11.04□□□□□ -0.64
UPF3B-201ENST00000276201 DDX25Q9UHL0 483 aaKnown RBP11.04□□□□□ -0.64
UPF3B-201ENST00000276201 CORO1CQ9ULV4 474 aaPredicted RBP11.04□□□□□ -0.64
UPF3B-201ENST00000276201 PCDHA3Q9Y5H8 950 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 LOXHD1Q8IVV2 1947 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 E7ENQ6 273 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 MEIS2O14770 477 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 DUSP11O75319 330 aaKnown RBP11.04□□□□□ -0.64
UPF3B-201ENST00000276201 TCEA3O75764 348 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 SUN1O94901 812 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 LUC7L3O95232 432 aaKnown RBP11.04□□□□□ -0.64
UPF3B-201ENST00000276201 SHBGP04278 402 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 ATP5DP30049 168 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 TNFAIP2Q03169 654 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 ACCSLQ4AC99 568 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 HERC4Q5GLZ8 1057 aaPredicted RBP11.04□□□□□ -0.64
UPF3B-201ENST00000276201 TMEM63BQ5T3F8 832 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 DCAF12L1Q5VU92 463 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 USP17L6PQ6QN14 398 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 ASRGL1Q7L266 308 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 NECAB2Q7Z6G3 386 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 GPBP1Q86WP2 473 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 RHOT2Q8IXI1 618 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 IL31RAQ8NI17 732 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 LNX1Q8TBB1 728 aaPredicted RBP11.04□□□□□ -0.64
UPF3B-201ENST00000276201 TCP11Q8WWU5 503 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 STAMBPL1Q96FJ0 436 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 BORCS6Q96GS4 357 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 IWS1Q96ST2 819 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 MPHOSPH6Q99547 160 aaKnown RBP11.04□□□□□ -0.64
UPF3B-201ENST00000276201 TRIM51Q9BSJ1 452 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 MKNK1Q9BUB5 465 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 FGFBP2Q9BYJ0 223 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 STK33Q9BYT3 514 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 CELF4Q9BZC1 486 aaKnown RBP11.04□□□□□ -0.64
UPF3B-201ENST00000276201 DPH5Q9H2P9 285 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 C11orf49Q9H6J7 331 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 CTNNAL1Q9UBT7 734 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 PRKAG3Q9UGI9 489 aa11.04□□□□□ -0.64
UPF3B-201ENST00000276201 FRMPD4Q14CM0 1322 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 RBM47A0AV96 593 aaKnown RBP11.03□□□□□ -0.64
UPF3B-201ENST00000276201 PIK3CDO00329 1044 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 ADAMTS4O75173 837 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 MTA2O94776 668 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 ACTN1P12814 892 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 SMPD1P17405 629 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 SOX5P35711 763 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 BZW1Q7L1Q6 419 aaKnown RBP11.03□□□□□ -0.64
UPF3B-201ENST00000276201 TEX9Q8N6V9 391 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 C12orf50Q8NA57 414 aaPredicted RBP11.03□□□□□ -0.64
UPF3B-201ENST00000276201 ARRDC4Q8NCT1 418 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 SLCO2A1Q92959 643 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 SERPINB12Q96P63 405 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 RPS6KC1Q96S38 1066 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 PDCD2LQ9BRP1 358 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 UPF3AQ9H1J1 476 aaKnown RBP11.03□□□□□ -0.64
UPF3B-201ENST00000276201 AZI2Q9H6S1 392 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 PSTPIP2Q9H939 334 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 LRRC4CQ9HCJ2 640 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 PCDHA12Q9UN75 941 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 GNEQ9Y223 722 aaKnown RBP11.03□□□□□ -0.64
UPF3B-201ENST00000276201 UBE4BO95155 1302 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 MYADML2A6NDP7 307 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 SPDYE3A6NKU9 549 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 MYCNP04198 464 aaPredicted RBP11.03□□□□□ -0.64
UPF3B-201ENST00000276201 NR3C2P08235 984 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 CCNB1P14635 433 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 PAX7P23759 505 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 COPS2P61201 443 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 AUHQ13825 339 aaKnown RBP11.03□□□□□ -0.64
UPF3B-201ENST00000276201 NAA25Q14CX7 972 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 UBE2SQ16763 222 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 ARSHQ5FYA8 562 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 RNF43Q68DV7 783 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 IQSEC1Q6DN90 963 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 GPIHBP1Q8IV16 184 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 ARMC2Q8NEN0 867 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 SLC35G2Q8TBE7 412 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 AGAP11Q8TF27 550 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 ART4Q93070 314 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 SLC35C1Q96A29 364 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 GRAMD1AQ96CP6 724 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 ELAC2Q9BQ52 826 aaKnown RBP11.03□□□□□ -0.64
UPF3B-201ENST00000276201 SELENOSQ9BQE4 189 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 RPL26L1Q9UNX3 145 aaKnown RBP11.03□□□□□ -0.64
UPF3B-201ENST00000276201 ARL2BPQ9Y2Y0 163 aa11.03□□□□□ -0.64
UPF3B-201ENST00000276201 ALPK3Q96L96 1907 aa11.02□□□□□ -0.64
UPF3B-201ENST00000276201 ANKRD62A6NC57 917 aa11.02□□□□□ -0.65
UPF3B-201ENST00000276201 KBTBD13C9JR72 458 aa11.02□□□□□ -0.65
UPF3B-201ENST00000276201 TBX3O15119 743 aa11.02□□□□□ -0.65
UPF3B-201ENST00000276201 RIPK2O43353 540 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms